U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    LOC111794430 NAC domain-containing protein 78-like [ Cucurbita pepo subsp. pepo (vegetable marrow) ]

    Gene ID: 111794430, updated on 21-Dec-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC111794430
    Gene description
    NAC domain-containing protein 78-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cucurbita pepo subsp. pepo (sub-species: pepo)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC111794430 in Genome Data Viewer
    Location:
    chromosome: LG01
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    100 current ASM280686v2 (GCF_002806865.1) LG01 NC_036638.1 (18793859..18797346, complement)

    Chromosome LG01 - NC_036638.1Genomic Context describing neighboring genes Neighboring gene cyclin-dependent protein kinase inhibitor SMR1-like Neighboring gene acyl-CoA-binding domain-containing protein 4 Neighboring gene ras-related protein RABC2a-like Neighboring gene uncharacterized LOC111788406

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_036638.1 Chromosome LG01 Reference ASM280686v2 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    NAC domain-containing protein 78-like

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Cucurbita pepo subsp. pepo Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM280686v2 Primary Assembly

    Genomic

    1. NC_036638.1 Reference ASM280686v2 Primary Assembly

      Range
      18793859..18797346 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_023676447.1 → XP_023532215.1  NAC domain-containing protein 78-like isoform X1

      UniProtKB/TrEMBL
      A0A345BTE0
      Conserved Domains (1) summary
      pfam02365
      Location:10 → 136
      NAM; No apical meristem (NAM) protein

    2. XM_023676455.1 → XP_023532223.1  NAC domain-containing protein 78-like isoform X2

      UniProtKB/TrEMBL
      A0A345BTE0
      Conserved Domains (1) summary
      pfam02365
      Location:10 → 136
      NAM; No apical meristem (NAM) protein
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases