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    LOC111497085 endoplasmic reticulum oxidoreductin-1-like [ Cucurbita maxima (winter squash) ]

    Gene ID: 111497085, updated on 22-Oct-2023

    Summary

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    Gene symbol
    LOC111497085
    Gene description
    endoplasmic reticulum oxidoreductin-1-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cucurbita maxima
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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    Genomic context

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    See LOC111497085 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    100 current Cmax_1.0 (GCF_002738345.1) Unplaced Scaffold NW_019272039.1 (523320..527296, complement)

    NW_019272039.1Genomic Context describing neighboring genes Neighboring gene p21-activated protein kinase-interacting protein 1-like Neighboring gene uncharacterized LOC111497089 Neighboring gene 50S ribosomal protein HLP, mitochondrial-like Neighboring gene transcription factor TCP2-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_019272039 Unplaced Scaffold Reference Cmax_1.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables FAD binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein-disulfide reductase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables thiol oxidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein folding in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in endoplasmic reticulum membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    endoplasmic reticulum oxidoreductin-1-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Cucurbita maxima Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Cmax_1.0

    Genomic

    1. NW_019272039.1 Reference Cmax_1.0

      Range
      523320..527296 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_023147716.1 → XP_023003484.1  endoplasmic reticulum oxidoreductin-1-like

      UniProtKB/TrEMBL
      A0A6J1KWP3
      Conserved Domains (1) summary
      pfam04137
      Location:77 → 420
      ERO1; Endoplasmic Reticulum Oxidoreductin 1 (ERO1)

    2. XM_023147715.1 → XP_023003483.1  endoplasmic reticulum oxidoreductin-1-like

      UniProtKB/TrEMBL
      A0A6J1KWP3
      Conserved Domains (1) summary
      pfam04137
      Location:77 → 420
      ERO1; Endoplasmic Reticulum Oxidoreductin 1 (ERO1)
    Nucleotide Protein
    Heading Accession and Version

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