U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    LOC111492717 DExH-box ATP-dependent RNA helicase DExH11 [ Cucurbita maxima (winter squash) ]

    Gene ID: 111492717, updated on 22-Oct-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC111492717
    Gene description
    DExH-box ATP-dependent RNA helicase DExH11
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cucurbita maxima
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC111492717 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    23
    Annotation release Status Assembly Chr Location
    100 current Cmax_1.0 (GCF_002738345.1) Unplaced Scaffold NW_019272034.1 (3362793..3377928)

    NW_019272034.1Genomic Context describing neighboring genes Neighboring gene serine/arginine-rich splicing factor SR45a-like Neighboring gene zinc finger CCCH domain-containing protein 40-like Neighboring gene uncharacterized LOC111493148 Neighboring gene laccase-4-like

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NW_019272034 Unplaced Scaffold Reference Cmax_1.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA helicase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decay IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of Ski complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    DExH-box ATP-dependent RNA helicase DExH11

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Cucurbita maxima Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Cmax_1.0

    Genomic

    1. NW_019272034.1 Reference Cmax_1.0

      Range
      3362793..3377928
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_023142139.1 → XP_022997907.1  DExH-box ATP-dependent RNA helicase DExH11 isoform X1

      UniProtKB/TrEMBL
      A0A6J1K6C8
      Conserved Domains (1) summary
      cl28230
      Location:351 → 1348
      Dob10; Superfamily II RNA helicase [Replication, recombination and repair]

    2. XM_023142141.1 → XP_022997909.1  DExH-box ATP-dependent RNA helicase DExH11 isoform X3

      UniProtKB/TrEMBL
      A0A6J1KCV3
      Conserved Domains (1) summary
      cl28230
      Location:347 → 1344
      Dob10; Superfamily II RNA helicase [Replication, recombination and repair]

    3. XM_023142140.1 → XP_022997908.1  DExH-box ATP-dependent RNA helicase DExH11 isoform X2

      UniProtKB/TrEMBL
      A0A6J1KFA8
      Conserved Domains (1) summary
      cl28230
      Location:350 → 1347
      Dob10; Superfamily II RNA helicase [Replication, recombination and repair]

    4. XM_023142142.1 → XP_022997910.1  DExH-box ATP-dependent RNA helicase DExH11 isoform X4

      UniProtKB/TrEMBL
      A0A6J1KB75
      Conserved Domains (1) summary
      cl28230
      Location:346 → 1343
      Dob10; Superfamily II RNA helicase [Replication, recombination and repair]
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases