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    LOC111490758 rhodanese-like/PpiC domain-containing protein 12, chloroplastic [ Cucurbita maxima (winter squash) ]

    Gene ID: 111490758, updated on 22-Oct-2023

    Summary

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    Gene symbol
    LOC111490758
    Gene description
    rhodanese-like/PpiC domain-containing protein 12, chloroplastic
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cucurbita maxima
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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    Genomic context

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    See LOC111490758 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    100 current Cmax_1.0 (GCF_002738345.1) Unplaced Scaffold NW_019272032.1 (2352272..2358255)

    NW_019272032.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111490797 Neighboring gene protein CLT1, chloroplastic Neighboring gene E3 ubiquitin-protein ligase KEG-like Neighboring gene calcium-dependent protein kinase 34-like Neighboring gene splicing factor 3B subunit 6-like protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_019272032 Unplaced Scaffold Reference Cmax_1.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables peptidyl-prolyl cis-trans isomerase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    rhodanese-like/PpiC domain-containing protein 12, chloroplastic

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Cucurbita maxima Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Cmax_1.0

    Genomic

    1. NW_019272032.1 Reference Cmax_1.0

      Range
      2352272..2358255
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_023139350.1 → XP_022995118.1  rhodanese-like/PpiC domain-containing protein 12, chloroplastic isoform X1

      UniProtKB/TrEMBL
      A0A6J1K700
      Conserved Domains (2) summary
      pfam00639
      Location:91 → 172
      Rotamase; PPIC-type PPIASE domain
      cl00125
      Location:183 → 286
      RHOD; Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein. The cysteine containing enzymatically active version of the domain is also found in the Cdc25 class of protein phosphatases and a variety of proteins ...

    2. XM_023139351.1 → XP_022995119.1  rhodanese-like/PpiC domain-containing protein 12, chloroplastic isoform X2

      UniProtKB/TrEMBL
      A0A6J1K4T2
      Conserved Domains (2) summary
      pfam00639
      Location:46 → 127
      Rotamase; PPIC-type PPIASE domain
      cl00125
      Location:138 → 241
      RHOD; Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein. The cysteine containing enzymatically active version of the domain is also found in the Cdc25 class of protein phosphatases and a variety of proteins ...
    Nucleotide Protein
    Heading Accession and Version

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