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    LOC111437457 E3 ubiquitin-protein ligase CHIP-like [ Cucurbita moschata (crookneck pumpkin) ]

    Gene ID: 111437457, updated on 22-Oct-2023

    Summary

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    Gene symbol
    LOC111437457
    Gene description
    E3 ubiquitin-protein ligase CHIP-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cucurbita moschata
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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    Genomic context

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    See LOC111437457 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    100 current Cmos_1.0 (GCF_002738365.1) Unplaced Scaffold NW_019268579.1 (374723..378384, complement)

    NW_019268579.1Genomic Context describing neighboring genes Neighboring gene GLABRA2 expression modulator-like Neighboring gene U-box domain-containing protein 9-like Neighboring gene ER lumen protein-retaining receptor-like Neighboring gene uncharacterized LOC111437415 Neighboring gene ninja-family protein AFP2-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_019268579 Unplaced Scaffold Reference Cmos_1.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein-folding chaperone binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ubiquitin protein ligase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cellular response to misfolded protein IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of proteolysis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein polyubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein quality control for misfolded or incompletely synthesized proteins IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    E3 ubiquitin-protein ligase CHIP-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Cucurbita moschata Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Cmos_1.0

    Genomic

    1. NW_019268579.1 Reference Cmos_1.0

      Range
      374723..378384 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_023075442.1 → XP_022931210.1  E3 ubiquitin-protein ligase CHIP-like

      UniProtKB/TrEMBL
      A0A6J1EYU4
      Conserved Domains (4) summary
      sd00006
      Location:15 → 43
      TPR; TPR repeat [structural motif]
      cd16654
      Location:205 → 271
      RING-Ubox_CHIP; U-box domain, a modified RING finger, found in carboxyl terminus of HSP70-interacting protein (CHIP) and similar proteins
      cl26005
      Location:13 → 84
      PLN03088; SGT1, suppressor of G2 allele of SKP1; Provisional
      cl26536
      Location:141 → 276
      Ufd2P_core; Ubiquitin elongating factor core
    Nucleotide Protein
    Heading Accession and Version

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