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    LOC111435317 protein kinase PVPK-1-like [ Cucurbita moschata (crookneck pumpkin) ]

    Gene ID: 111435317, updated on 22-Oct-2023

    Summary

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    Gene symbol
    LOC111435317
    Gene description
    protein kinase PVPK-1-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cucurbita moschata
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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    Genomic context

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    See LOC111435317 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    100 current Cmos_1.0 (GCF_002738365.1) Unplaced Scaffold NW_019268564.1 (665597..669314, complement)

    NW_019268564.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111435083 Neighboring gene serine/threonine-protein kinase HT1-like Neighboring gene altered inheritance of mitochondria protein 32-like Neighboring gene uncharacterized LOC111435323 Neighboring gene heterogeneous nuclear ribonucleoprotein A3-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_019268564 Unplaced Scaffold Reference Cmos_1.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein serine/threonine kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein kinase PVPK-1-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Cucurbita moschata Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Cmos_1.0

    Genomic

    1. NW_019268564.1 Reference Cmos_1.0

      Range
      665597..669314 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_023072771.1 → XP_022928539.1  protein kinase PVPK-1-like

      UniProtKB/TrEMBL
      A0A6J1EL46
      Conserved Domains (1) summary
      cd05574
      Location:275 → 635
      STKc_phototropin_like; Catalytic domain of Phototropin-like Serine/Threonine Kinases

    2. XM_023072769.1 → XP_022928537.1  protein kinase PVPK-1-like

      UniProtKB/TrEMBL
      A0A6J1EL46
      Conserved Domains (1) summary
      cd05574
      Location:275 → 635
      STKc_phototropin_like; Catalytic domain of Phototropin-like Serine/Threonine Kinases
    Nucleotide Protein
    Heading Accession and Version

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