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    LOC111447656 dof zinc finger protein DOF5.7 [ Cucurbita moschata (crookneck pumpkin) ]

    Gene ID: 111447656, updated on 22-Oct-2023

    Summary

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    Gene symbol
    LOC111447656
    Gene description
    dof zinc finger protein DOF5.7
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cucurbita moschata
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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    Genomic context

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    See LOC111447656 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    100 current Cmos_1.0 (GCF_002738365.1) Unplaced Scaffold NW_019268525.1 (4620572..4621906)

    NW_019268525.1Genomic Context describing neighboring genes Neighboring gene L-type lectin-domain containing receptor kinase IX.1-like Neighboring gene probable rhamnogalacturonate lyase B Neighboring gene cytochrome c1-2, heme protein, mitochondrial-like Neighboring gene protein NETWORKED 2D-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_019268525 Unplaced Scaffold Reference Cmos_1.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables DNA-binding transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    dof zinc finger protein DOF5.7

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Cucurbita moschata Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Cmos_1.0

    Genomic

    1. NW_019268525.1 Reference Cmos_1.0

      Range
      4620572..4621906
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_023086930.1 → XP_022942698.1  dof zinc finger protein DOF5.7

      UniProtKB/TrEMBL
      A0A6J1FVF9
      Conserved Domains (1) summary
      pfam02701
      Location:65 → 117
      zf-Dof; Dof domain, zinc finger
    Nucleotide Protein
    Heading Accession and Version

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