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    LOC111443419 aspartate--tRNA ligase 2, cytoplasmic-like [ Cucurbita moschata (crookneck pumpkin) ]

    Gene ID: 111443419, updated on 22-Oct-2023

    Summary

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    Gene symbol
    LOC111443419
    Gene description
    aspartate--tRNA ligase 2, cytoplasmic-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cucurbita moschata
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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    Genomic context

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    See LOC111443419 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    100 current Cmos_1.0 (GCF_002738365.1) Unplaced Scaffold NW_019268521.1 (4692506..4696713, complement)

    NW_019268521.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111443679 Neighboring gene DDB1- and CUL4-associated factor homolog 1-like Neighboring gene DDT domain-containing protein DDR4 Neighboring gene uncharacterized LOC111442884

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_019268521 Unplaced Scaffold Reference Cmos_1.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables aspartate-tRNA ligase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in aspartyl-tRNA aminoacylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of aminoacyl-tRNA synthetase multienzyme complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    aspartate--tRNA ligase 2, cytoplasmic-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Cucurbita moschata Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Cmos_1.0

    Genomic

    1. NW_019268521.1 Reference Cmos_1.0

      Range
      4692506..4696713 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_023081227.1 → XP_022936995.1  aspartate--tRNA ligase 2, cytoplasmic-like

      UniProtKB/TrEMBL
      A0A6J1FFA5
      Conserved Domains (1) summary
      PLN02850
      Location:52 → 545
      PLN02850; aspartate-tRNA ligase
    Nucleotide Protein
    Heading Accession and Version

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