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    LOC111440723 uncharacterized LOC111440723 [ Cucurbita moschata (crookneck pumpkin) ]

    Gene ID: 111440723, updated on 22-Oct-2023

    Summary

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    Gene symbol
    LOC111440723
    Gene description
    uncharacterized LOC111440723
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cucurbita moschata
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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    Genomic context

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    See LOC111440723 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    100 current Cmos_1.0 (GCF_002738365.1) Unplaced Scaffold NW_019268519.1 (705280..706988, complement)

    NW_019268519.1Genomic Context describing neighboring genes Neighboring gene DDT domain-containing protein DDR4-like Neighboring gene protein NUCLEAR FUSION DEFECTIVE 4-like Neighboring gene protein NUCLEAR FUSION DEFECTIVE 4-like Neighboring gene uncharacterized LOC111436182

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_019268519 Unplaced Scaffold Reference Cmos_1.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein LOC111440723

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Cucurbita moschata Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Cmos_1.0

    Genomic

    1. NW_019268519.1 Reference Cmos_1.0

      Range
      705280..706988 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_023077594.1 → XP_022933362.1  uncharacterized protein LOC111440723

      UniProtKB/TrEMBL
      A0A6J1EZJ6
      Conserved Domains (2) summary
      cl21472
      Location:12 → 249
      MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...
      cl26868
      Location:289 → 449
      2A0111; oxalate/formate antiporter family transporter
    Nucleotide Protein
    Heading Accession and Version

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