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    LOC111462511 heterogeneous nuclear ribonucleoprotein 1-like [ Cucurbita moschata (crookneck pumpkin) ]

    Gene ID: 111462511, updated on 22-Oct-2023

    Summary

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    Gene symbol
    LOC111462511
    Gene description
    heterogeneous nuclear ribonucleoprotein 1-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cucurbita moschata
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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    Genomic context

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    See LOC111462511 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    100 current Cmos_1.0 (GCF_002738365.1) Unplaced Scaffold NW_019268517.1 (6252248..6255490)

    NW_019268517.1Genomic Context describing neighboring genes Neighboring gene probable serine/threonine-protein kinase WNK11 Neighboring gene Plant small nucleolar RNA R71 Neighboring gene uncharacterized LOC111462642 Neighboring gene transcriptional regulator SUPERMAN-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_019268517 Unplaced Scaffold Reference Cmos_1.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    heterogeneous nuclear ribonucleoprotein 1-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Cucurbita moschata Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Cmos_1.0

    Genomic

    1. NW_019268517.1 Reference Cmos_1.0

      Range
      6252248..6255490
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_023106144.1 → XP_022961912.1  heterogeneous nuclear ribonucleoprotein 1-like isoform X1

      UniProtKB/TrEMBL
      A0A6J1HBD5
      Conserved Domains (2) summary
      cd12325
      Location:17 → 87
      RRM1_hnRNPA_hnRNPD_like; RNA recognition motif 1 in heterogeneous nuclear ribonucleoprotein hnRNP A and hnRNP D subfamilies and similar proteins
      cd12327
      Location:113 → 192
      RRM2_DAZAP1; RNA recognition motif 2 in Deleted in azoospermia-associated protein 1 (DAZAP1) and similar proteins

    2. XM_023106223.1 → XP_022961991.1  heterogeneous nuclear ribonucleoprotein 1-like isoform X2

      UniProtKB/TrEMBL
      A0A6J1HBV2
      Conserved Domains (2) summary
      cd12325
      Location:8 → 78
      RRM1_hnRNPA_hnRNPD_like; RNA recognition motif 1 in heterogeneous nuclear ribonucleoprotein hnRNP A and hnRNP D subfamilies and similar proteins
      cd12327
      Location:104 → 183
      RRM2_DAZAP1; RNA recognition motif 2 in Deleted in azoospermia-associated protein 1 (DAZAP1) and similar proteins
    Nucleotide Protein
    Heading Accession and Version

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