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    LOC111015769 putative ALA-interacting subunit 2 [ Momordica charantia (bitter melon) ]

    Gene ID: 111015769, updated on 21-Dec-2023

    Summary

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    Gene symbol
    LOC111015769
    Gene description
    putative ALA-interacting subunit 2
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Momordica charantia
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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    Genomic context

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    See LOC111015769 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    100 current ASM199503v1 (GCF_001995035.1) Unplaced Scaffold NW_019104529.1 (297271..304748)

    NW_019104529.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111015772 Neighboring gene p21-activated protein kinase-interacting protein 1-like Neighboring gene DEAD-box ATP-dependent RNA helicase 1 Neighboring gene CBL-interacting serine/threonine-protein kinase 23

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_019104529 Unplaced Scaffold Reference ASM199503v1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in Golgi apparatus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    putative ALA-interacting subunit 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Momordica charantia Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM199503v1

    Genomic

    1. NW_019104529.1 Reference ASM199503v1

      Range
      297271..304748
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_022290917.1 → XP_022146609.1  putative ALA-interacting subunit 2 isoform X2

      UniProtKB/TrEMBL
      A0A6J1CYK6
      Conserved Domains (1) summary
      pfam03381
      Location:65 → 324
      CDC50; LEM3 (ligand-effect modulator 3) family / CDC50 family

    2. XM_022290915.1 → XP_022146607.1  putative ALA-interacting subunit 2 isoform X1

      UniProtKB/TrEMBL
      A0A6J1D017
      Conserved Domains (1) summary
      pfam03381
      Location:72 → 331
      CDC50; LEM3 (ligand-effect modulator 3) family / CDC50 family

    3. XM_022290916.1 → XP_022146608.1  putative ALA-interacting subunit 2 isoform X1

      UniProtKB/TrEMBL
      A0A6J1D017
      Conserved Domains (1) summary
      pfam03381
      Location:72 → 331
      CDC50; LEM3 (ligand-effect modulator 3) family / CDC50 family

    4. XM_022290918.1 → XP_022146610.1  putative ALA-interacting subunit 2 isoform X3

      UniProtKB/TrEMBL
      A0A6J1CXQ3
      Conserved Domains (1) summary
      pfam03381
      Location:2 → 257
      CDC50; LEM3 (ligand-effect modulator 3) family / CDC50 family
    Nucleotide Protein Strain
    Heading Accession and Version

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