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    LOC111011774 pentatricopeptide repeat-containing protein At1g66345, mitochondrial [ Momordica charantia (bitter melon) ]

    Gene ID: 111011774, updated on 21-Dec-2023

    Summary

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    Gene symbol
    LOC111011774
    Gene description
    pentatricopeptide repeat-containing protein At1g66345, mitochondrial
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Momordica charantia
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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    Genomic context

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    See LOC111011774 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    100 current ASM199503v1 (GCF_001995035.1) Unplaced Scaffold NW_019104505.1 (1416982..1419355, complement)

    NW_019104505.1Genomic Context describing neighboring genes Neighboring gene geranylgeranyl pyrophosphate synthase, chloroplastic-like Neighboring gene geranylgeranyl pyrophosphate synthase, chloroplastic-like Neighboring gene glucan endo-1,3-beta-glucosidase 2-like Neighboring gene DNA repair protein RAD4

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_019104505 Unplaced Scaffold Reference ASM199503v1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    pentatricopeptide repeat-containing protein At1g66345, mitochondrial

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Momordica charantia Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM199503v1

    Genomic

    1. NW_019104505.1 Reference ASM199503v1

      Range
      1416982..1419355 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_022285664.1 → XP_022141356.1  pentatricopeptide repeat-containing protein At1g66345, mitochondrial isoform X2

      UniProtKB/TrEMBL
      A0A6J1CIX9
      Conserved Domains (2) summary
      sd00004
      Location:300 → 327
      PPR; PPR repeat [structural motif]
      cl25449
      Location:161 → 484
      PPR_2; PPR repeat family

    2. XM_022285663.1 → XP_022141355.1  pentatricopeptide repeat-containing protein At1g66345, mitochondrial isoform X1

      UniProtKB/TrEMBL
      A0A6J1CHU5
      Conserved Domains (2) summary
      sd00004
      Location:300 → 327
      PPR; PPR repeat [structural motif]
      cl25449
      Location:161 → 531
      PPR_2; PPR repeat family
    Nucleotide Protein Strain
    Heading Accession and Version

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