U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    LOC111008721 uncharacterized LOC111008721 [ Momordica charantia (bitter melon) ]

    Gene ID: 111008721, updated on 21-Dec-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC111008721
    Gene description
    uncharacterized LOC111008721
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Momordica charantia
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC111008721 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    100 current ASM199503v1 (GCF_001995035.1) Unplaced Scaffold NW_019104497.1 (1372626..1375746)

    NW_019104497.1Genomic Context describing neighboring genes Neighboring gene transfer RNA leucine (anticodon CAG) Neighboring gene uncharacterized LOC111008596 Neighboring gene uncharacterized LOC111008720 Neighboring gene UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NW_019104497 Unplaced Scaffold Reference ASM199503v1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ubiquitin protein ligase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    uncharacterized protein LOC111008721

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Momordica charantia Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM199503v1

    Genomic

    1. NW_019104497.1 Reference ASM199503v1

      Range
      1372626..1375746
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_022281503.1 → XP_022137195.1  uncharacterized protein LOC111008721 isoform X1

      UniProtKB/TrEMBL
      A0A6J1C605
      Conserved Domains (1) summary
      cd16481
      Location:324 → 366
      RING-H2_TTC3; RING finger, H2 subclass, found in Tetratricopeptide repeat protein 3 (TTC3) and similar proteins

    2. XM_022281504.1 → XP_022137196.1  uncharacterized protein LOC111008721 isoform X2

      UniProtKB/TrEMBL
      A0A6J1C5U0
      Conserved Domains (1) summary
      cd16481
      Location:323 → 365
      RING-H2_TTC3; RING finger, H2 subclass, found in Tetratricopeptide repeat protein 3 (TTC3) and similar proteins
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases