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    LOC111008290 pectin acetylesterase 8-like [ Momordica charantia (bitter melon) ]

    Gene ID: 111008290, updated on 21-Dec-2023

    Summary

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    Gene symbol
    LOC111008290
    Gene description
    pectin acetylesterase 8-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Momordica charantia
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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    Genomic context

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    See LOC111008290 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    100 current ASM199503v1 (GCF_001995035.1) Unplaced Scaffold NW_019104496.1 (517935..521597, complement)

    NW_019104496.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111008422 Neighboring gene uncharacterized LOC111008291 Neighboring gene shikimate O-hydroxycinnamoyltransferase Neighboring gene pentatricopeptide repeat-containing protein At4g19440, chloroplastic Neighboring gene uncharacterized LOC111008306

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_019104496 Unplaced Scaffold Reference ASM199503v1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables pectin acetylesterase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell wall organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plant-type cell wall IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    pectin acetylesterase 8-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Momordica charantia Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM199503v1

    Genomic

    1. NW_019104496.1 Reference ASM199503v1

      Range
      517935..521597 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_022280938.1 → XP_022136630.1  pectin acetylesterase 8-like isoform X2

      UniProtKB/TrEMBL
      A0A6J1C417
      Conserved Domains (1) summary
      pfam03283
      Location:27 → 371
      PAE; Pectinacetylesterase

    2. XM_022280937.1 → XP_022136629.1  pectin acetylesterase 8-like isoform X1

      UniProtKB/TrEMBL
      A0A6J1C4V3
      Conserved Domains (1) summary
      pfam03283
      Location:51 → 395
      PAE; Pectinacetylesterase

    3. XM_022280939.1 → XP_022136631.1  pectin acetylesterase 8-like isoform X2

      UniProtKB/TrEMBL
      A0A6J1C417
      Conserved Domains (1) summary
      pfam03283
      Location:27 → 371
      PAE; Pectinacetylesterase
    Nucleotide Protein Strain
    Heading Accession and Version

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