U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    LOC111005935 VAN3-binding protein [ Momordica charantia (bitter melon) ]

    Gene ID: 111005935, updated on 25-Aug-2022

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC111005935
    Gene description
    VAN3-binding protein
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Momordica charantia
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC111005935 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    100 current ASM199503v1 (GCF_001995035.1) Unplaced Scaffold NW_019104488.1 (1922243..1925020)

    NW_019104488.1Genomic Context describing neighboring genes Neighboring gene protein EMBRYONIC FLOWER 1-like Neighboring gene U-box domain-containing protein 26 Neighboring gene probable beta-1,4-xylosyltransferase IRX9H Neighboring gene protein JINGUBANG-like Neighboring gene carotenoid 9,10(9',10')-cleavage dioxygenase 1-like

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NW_019104488 Unplaced Scaffold Reference ASM199503v1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    General protein information

    Go to the top of the page Help
    Preferred Names
    VAN3-binding protein

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Momordica charantia Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM199503v1

    Genomic

    1. NW_019104488.1 Reference ASM199503v1

      Range
      1922243..1925020
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_022277649.1 → XP_022133341.1  VAN3-binding protein isoform X2

      UniProtKB/TrEMBL
      A0A6J1BUT4
      Conserved Domains (1) summary
      pfam05703
      Location:42 → 287
      Auxin_canalis; Auxin canalisation

    2. XM_022277636.1 → XP_022133328.1  VAN3-binding protein isoform X1

      UniProtKB/TrEMBL
      A0A6J1BYU9
      Conserved Domains (2) summary
      pfam05703
      Location:42 → 287
      Auxin_canalis; Auxin canalisation
      pfam08458
      Location:318 → 423
      PH_2; Plant pleckstrin homology-like region

    RNA

    1. XR_002600798.1 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases