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    LOC110290302 putative olfactory receptor 5AK3 [ Mus caroli (Ryukyu mouse) ]

    Gene ID: 110290302, updated on 9-Nov-2023

    Summary

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    Gene symbol
    LOC110290302
    Gene description
    putative olfactory receptor 5AK3
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Mus caroli
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
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    Genomic context

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    See LOC110290302 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    101 current CAROLI_EIJ_v1.1 (GCF_900094665.1) 2 NC_034571.1 (79548013..79549074, complement)

    Chromosome 2 - NC_034571.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L35a pseudogene Neighboring gene putative olfactory receptor 5AK3 Neighboring gene putative olfactory receptor 5AK3 Neighboring gene olfactory receptor 5AK2-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_034571.1 Chromosome 2 Reference CAROLI_EIJ_v1.1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables G protein-coupled receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables odorant binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables olfactory receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in G protein-coupled receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in sensory perception of smell IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    putative olfactory receptor 5AK3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Mus caroli Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference CAROLI_EIJ_v1.1 Primary Assembly

    Genomic

    1. NC_034571.1 Reference CAROLI_EIJ_v1.1 Primary Assembly

      Range
      79548013..79549074 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_021156827.1 → XP_021012486.1  putative olfactory receptor 5AK3

      UniProtKB/TrEMBL
      A0A6P5PDC7
      Conserved Domains (2) summary
      cd14964
      Location:27 → 51
      7tm_GPCRs; TM helix 1 [structural motif]
      cl28897
      Location:12 → 297
      7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily
    Nucleotide Protein
    Heading Accession and Version

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