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    LOC100306155 uncharacterized LOC100306155 [ Glycine max (soybean) ]

    Gene ID: 100306155, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC100306155
    Gene description
    uncharacterized LOC100306155
    Locus tag
    GLYMA_04G021700v4
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Glycine max
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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    Genomic context

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    See LOC100306155 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    104 current Glycine_max_v4.0 (GCF_000004515.6) 4 NC_016091.4 (1705810..1708705)
    103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 4 NC_016091.3 (1709659..1712549)

    Chromosome 4 - NC_016091.4Genomic Context describing neighboring genes Neighboring gene probable 26S proteasome non-ATPase regulatory subunit 3 Neighboring gene putative expansin Neighboring gene UPF0496 protein At1g20180 Neighboring gene la-related protein 1C

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein LOC100306155

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001251504.2 → NP_001238433.2  uncharacterized protein LOC100306155

      Status: VALIDATED

      Source sequence(s)
      ACUP04001270, BT090122
      UniProtKB/TrEMBL
      C6SY75, I1JT02
      Conserved Domains (1) summary
      cl11404
      Location:139 → 196
      Biotinyl_lipoyl_domains; Biotinyl_lipoyl_domains are present in biotin-dependent carboxylases/decarboxylases, the dihydrolipoyl acyltransferase component (E2) of 2-oxo acid dehydrogenases, and the H-protein of the glycine cleavage system (GCS). These domains transport CO2, acyl, ...

    RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Glycine_max_v4.0 Primary Assembly

    Genomic

    1. NC_016091.4 Reference Glycine_max_v4.0 Primary Assembly

      Range
      1705810..1708705
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006577700.4 → XP_006577763.1  uncharacterized protein LOC100306155 isoform X1

      UniProtKB/TrEMBL
      C6SY75, K7KHP8
    Nucleotide Protein
    Heading Accession and Version

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