ldhb.S lactate dehydrogenase B S homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: ldhb.S
Official Full Name: lactate dehydrogenase B S homeolog
Primary source: Xenbase:XB-GENE-5908692
Locus tag: XELAEV_18019895mg
See related: EnsemblRapid:ENSXLAG00005000919 AllianceGenome:Xenbase:XB-GENE-5908692
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: ldh2; ldhb; ldhc; LDH-B; ldh-h; ldhba; trg-5; ldhb-a; ldhb-b; ldhb.L
Summary: Predicted to enable L-lactate dehydrogenase activity. Predicted to act upstream of or within lactate metabolic process and pyruvate metabolic process. Predicted to be located in cytoplasm. Orthologous to human LDHB (lactate dehydrogenase B). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

Location:: chromosome: 3S

Exon count:: 9

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	3S	NC_054376.1 (6880742..6893430, complement)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	3S	NC_030729.1 (6906421..6919130, complement)

Chromosome 3S - NC_054376.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables L-lactate dehydrogenase activity	IEA Inferred from Electronic Annotation more info
enables oxidoreductase activity	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within carboxylic acid metabolic process	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within lactate metabolic process	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within pyruvate metabolic process	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in cytoplasm	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: L-lactate dehydrogenase B chain

Names: L-lactate dehydrogenase C chain; LDH-C; lactate dehydrogenase 2, B chain; lactate dehydrogenase B L homeolog; lactate dehydrogenase-B; lactate dehydrogenase-C

XP_018109579.1

EC 1.1.1.27

XP_018109580.1

EC 1.1.1.27

XP_018109581.1

EC 1.1.1.27

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001087383.3 → NP_001080852.2 L-lactate dehydrogenase B chain

Status: VALIDATED

Source sequence(s)

JAGEVR010000040

UniProtKB/TrEMBL

A0A1L8GQX2, A0A974D8E2