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    yafC DNA-binding transcriptional regulator YafC [ Klebsiella variicola ]

    Gene ID: 69734831, updated on 26-Nov-2023

    Summary

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    Gene symbol
    yafC
    Gene description
    DNA-binding transcriptional regulator YafC
    Locus tag
    GFC07_RS19425
    Gene type
    protein coding
    Organism
    Klebsiella variicola (strain: LEMB11)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Klebsiella/Raoultella group; Klebsiella
    Old locus tag
    GFC07_19425
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    Genomic context

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    NZ_CP045783.1Genomic Context describing neighboring genes Neighboring gene tRNA-Asp Neighboring gene 2,5-didehydrogluconate reductase DkgB Neighboring gene MFS transporter Neighboring gene endonuclease/exonuclease/phosphatase family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_CP045783.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Systematic discovery of uncharacterized transcription factors in Escherichia coli K-12 MG1655. Gao Y, et al. Nucleic Acids Res, 2018 Nov 16. PMID 30137486, Free PMC Article
    2. Emergence of Klebsiella variicola positive for NDM-9, a variant of New Delhi metallo-β-lactamase, in an urban river in South Korea. Di DY, et al. J Antimicrob Chemother, 2017 Apr 1. PMID 28087584

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    DNA-binding transcriptional regulator YafC

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_CP045783.1 Reference assembly

      Range
      4074734..4075639 complement
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_012968896.1 MULTISPECIES: DNA-binding transcriptional regulator YafC [Klebsiella]

      See identical proteins and their annotated locations for WP_012968896.1

      UniProtKB/TrEMBL
      A0A0B7GAW9, A0A0J4XWJ0
      Conserved Domains (2) summary
      cd08478
      Location:91 → 289
      PBP2_CrgA; The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA, contains the type 2 periplasmic binding domain
      pfam00126
      Location:6 → 64
      HTH_1; Bacterial regulatory helix-turn-helix protein, lysR family
    Nucleotide Protein
    Heading Accession and Version