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    rab41 RAB41, member RAS oncogene family [ Labrus bergylta (ballan wrasse) ]

    Gene ID: 109985442, updated on 12-Sep-2024

    Summary

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    Gene symbol
    rab41
    Gene description
    RAB41, member RAS oncogene family
    See related
    Ensembl:ENSLBEG00000008746
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Labrus bergylta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Labriformes; Labridae; Labrus
    Orthologs
    human zebrafish all
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    Genomic context

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    See rab41 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2024_06 current fLabBer1.1 (GCF_963930695.1) 9 NC_089203.1 (18175553..18184167, complement)
    101 previous assembly BallGen_V1 (GCF_900080235.1) Unplaced Scaffold NW_018114496.1 (1008390..1017004, complement)

    Chromosome 9 - NC_089203.1Genomic Context describing neighboring genes Neighboring gene PDZ domain containing 11 Neighboring gene START domain containing 14 Neighboring gene arrestin 3b, retinal (X-arrestin) Neighboring gene inositol polyphosphate phosphatase-like 1b

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ras-related protein Rab-41

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_963930695.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fLabBer1.1

    Genomic

    1. NC_089203.1 Reference fLabBer1.1

      Range
      18175553..18184167 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_020635781.3 → XP_020491437.1  ras-related protein Rab-41 isoform X4

      UniProtKB/TrEMBL
      A0A3Q3EVE6
      Related
      ENSLBEP00000011393.1
      Conserved Domains (1) summary
      cd01861
      Location:17 → 177
      Rab6; Rab GTPase family 6 (Rab6)

    2. XM_020635779.3 → XP_020491435.1  ras-related protein Rab-41 isoform X3

      UniProtKB/TrEMBL
      A0A3Q3EVB0
      Related
      ENSLBEP00000011358.1
      Conserved Domains (1) summary
      cd01861
      Location:17 → 177
      Rab6; Rab GTPase family 6 (Rab6)

    3. XM_020635780.3 → XP_020491436.1  ras-related protein Rab-41 isoform X2

      Conserved Domains (1) summary
      cd01861
      Location:17 → 177
      Rab6; Rab GTPase family 6 (Rab6)

    4. XM_020635778.3 → XP_020491434.1  ras-related protein Rab-41 isoform X1

      UniProtKB/TrEMBL
      A0A3Q3EVD3
      Related
      ENSLBEP00000011378.1
      Conserved Domains (1) summary
      cd01861
      Location:17 → 177
      Rab6; Rab GTPase family 6 (Rab6)
    Nucleotide Protein
    Heading Accession and Version

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