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    LOC103639025 serine carboxypeptidase-like 51 [ Zea mays ]

    Gene ID: 103639025, updated on 14-Dec-2023

    Summary

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    Gene symbol
    LOC103639025
    Gene description
    serine carboxypeptidase-like 51
    Locus tag
    ZEAMMB73_Zm00001d047235
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Zea mays
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
    Also known as
    GRMZM2G136495
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    Genomic context

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    See LOC103639025 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    103 current Zm-B73-REFERENCE-NAM-5.0 (GCF_902167145.1) 9 NC_050104.1 (127162184..127166187)
    102.20200423 previous assembly B73 RefGen_v4 (GCF_000005005.2) 9 NC_024467.2 (123531815..123535815)

    Chromosome 9 - NC_050104.1Genomic Context describing neighboring genes Neighboring gene transfer RNA lysine (anticodon UUU) Neighboring gene uncharacterized LOC103639023 Neighboring gene uncharacterized LOC100274889 Neighboring gene uncharacterized LOC100272729

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables serine-type carboxypeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in proteolysis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    serine carboxypeptidase-like 51; uncharacterized protein LOC103639025

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Zea mays Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

    Genomic

    1. NC_050104.1 Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

      Range
      127162184..127166187
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_020544039.2 → XP_020399628.1  uncharacterized protein LOC103639025 isoform X3

      Conserved Domains (1) summary
      cl08270
      Location:219 → 484
      Peptidase_S10; Serine carboxypeptidase

    2. XM_020544038.3 → XP_020399627.1  serine carboxypeptidase-like 51 isoform X1

      Conserved Domains (1) summary
      cl08270
      Location:219 → 559
      Peptidase_S10; Serine carboxypeptidase

    3. XM_008661799.4 → XP_008660021.1  serine carboxypeptidase-like 51 isoform X2

      Conserved Domains (1) summary
      cl08270
      Location:259 → 521
      Peptidase_S10; Serine carboxypeptidase

    4. XM_020544040.2 → XP_020399629.1  serine carboxypeptidase-like 51 isoform X4

      UniProtKB/TrEMBL
      A0A1D6P7Y3
      Conserved Domains (1) summary
      cl08270
      Location:23 → 460
      Peptidase_S10; Serine carboxypeptidase

    5. XM_008661801.2 → XP_008660023.1  serine carboxypeptidase-like 51 isoform X5

      UniProtKB/TrEMBL
      A0A1D6P7Y3
      Conserved Domains (1) summary
      cl08270
      Location:23 → 452
      Peptidase_S10; Serine carboxypeptidase

    6. XM_008661802.3 → XP_008660024.1  serine carboxypeptidase-like 51 isoform X6

      See identical proteins and their annotated locations for XP_008660024.1

      UniProtKB/TrEMBL
      A0A1D6P7Y3, A0A804R487
      Conserved Domains (1) summary
      cl08270
      Location:23 → 451
      Peptidase_S10; Serine carboxypeptidase
    Nucleotide Protein
    Heading Accession and Version

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