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    LOC109859136 pyroglutamylated RFamide peptide receptor-like [ Pseudomyrmex gracilis ]

    Gene ID: 109859136, updated on 1-Oct-2024

    Summary

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    Gene symbol
    LOC109859136
    Gene description
    pyroglutamylated RFamide peptide receptor-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pseudomyrmex gracilis
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Pseudomyrmecinae; Pseudomyrmex
    Orthologs
    honey bee all
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    Genomic context

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    See LOC109859136 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    100 current ASM200609v1 (GCF_002006095.1) Unplaced Scaffold NW_018020826.1 (84005..131534, complement)

    NW_018020826.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC109859141 Neighboring gene RNA-binding protein squid Neighboring gene protein LSM12 homolog Neighboring gene NACHT and WD repeat domain-containing protein 2 Neighboring gene Transcription-associated protein Nipped-A

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_018020826.1 Unplaced Scaffold Reference ASM200609v1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables peptide binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables thyrotropin-releasing hormone receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in G protein-coupled receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    pyroglutamylated RFamide peptide receptor-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Pseudomyrmex gracilis Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM200609v1

    Genomic

    1. NW_018020826.1 Reference ASM200609v1

      Range
      84005..131534 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_020437083.1 → XP_020292672.1  pyroglutamylated RFamide peptide receptor-like isoform X1

      Conserved Domains (2) summary
      cd14964
      Location:46 → 72
      7tm_GPCRs; TM helix 1 [structural motif]
      cl28897
      Location:45 → 363
      7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily

    2. XM_020437084.1 → XP_020292673.1  pyroglutamylated RFamide peptide receptor-like isoform X2

      Conserved Domains (2) summary
      cd14964
      Location:46 → 72
      7tm_GPCRs; TM helix 1 [structural motif]
      cl28897
      Location:45 → 363
      7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily

    3. XM_020437082.1 → XP_020292671.1  pyroglutamylated RFamide peptide receptor-like isoform X1

      Conserved Domains (2) summary
      cd14964
      Location:46 → 72
      7tm_GPCRs; TM helix 1 [structural motif]
      cl28897
      Location:45 → 363
      7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily
    Nucleotide Protein
    Heading Accession and Version

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    Other Literature Sources
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