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    DNAJB6 DnaJ heat shock protein family (Hsp40) member B6 [ Bos indicus (zebu cattle) ]

    Gene ID: 109557825, updated on 14-Mar-2024

    Summary

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    Gene symbol
    DNAJB6
    Gene description
    DnaJ heat shock protein family (Hsp40) member B6
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Bos indicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See DNAJB6 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    100 current Bos_indicus_1.0 (GCF_000247795.1) 4 NC_032653.1 (122874235..122907622)

    Chromosome 4 - NC_032653.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC109557824 Neighboring gene motor neuron and pancreas homeobox 1 Neighboring gene ubiquitin protein ligase E3C Neighboring gene protein tyrosine phosphatase receptor type N2 Neighboring gene non-SMC condensin II complex subunit G2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_032653.1 Chromosome 4 Reference Bos_indicus_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A preliminary sketch of horn cancer transcriptome in Indian zebu cattle. Tripathi AK, et al. Gene, 2012 Feb 1. PMID 22134011
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATPase activator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables Hsp70 protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables unfolded protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in chaperone-mediated protein folding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of proteasomal ubiquitin-dependent protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein refolding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in endoplasmic reticulum membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    dnaJ homolog subfamily B member 6

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Bos indicus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Bos_indicus_1.0 Primary Assembly

    Genomic

    1. NC_032653.1 Reference Bos_indicus_1.0 Primary Assembly

      Range
      122874235..122907622
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_019959381.1 → XP_019814940.1  dnaJ homolog subfamily B member 6 isoform X1

      UniProtKB/TrEMBL
      A0A6P5BRG6
      Conserved Domains (1) summary
      COG0484
      Location:2 → 106
      DnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

    2. XM_019959383.1 → XP_019814942.1  dnaJ homolog subfamily B member 6 isoform X2

      UniProtKB/TrEMBL
      A0A6P5BL64
      Conserved Domains (1) summary
      COG0484
      Location:2 → 106
      DnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
    Nucleotide Protein
    Heading Accession and Version

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