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    LOC107758951 serine/threonine-protein kinase 38-like [ Nicotiana tabacum (common tobacco) ]

    Gene ID: 107758951, updated on 28-Dec-2023

    Summary

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    Gene symbol
    LOC107758951
    Gene description
    serine/threonine-protein kinase 38-like
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Nicotiana tabacum
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
    Also known as
    PKTL7
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    Genomic context

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    See LOC107758951 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    100 current Ntab-TN90 (GCF_000715135.1) Unplaced Scaffold NW_015865264.1 (15284..23410, complement)

    NW_015865264.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein At1g03900-like Neighboring gene H/ACA ribonucleoprotein complex subunit 3-like protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_015865264.1 Unplaced Scaffold Reference Ntab-TN90 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A comprehensive gene expression analysis toward the understanding of growth and differentiation of tobacco BY-2 cells. Matsuoka K, et al. Plant Cell Physiol, 2004 Sep. PMID 15509851
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein serine/threonine kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in intracellular signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in peptidyl-serine phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    serine/threonine-protein kinase 38-like
    Names
    protein kinase
    XP_016432286.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001324622.2 → NP_001311551.2  serine/threonine-protein kinase 38-like

      Status: VALIDATED

      Source sequence(s)
      BP529264, FS415275, X71057
      UniProtKB/TrEMBL
      A0A1S3WXR3, Q40547

    RefSeqs of Annotated Genomes: Nicotiana tabacum Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Ntab-TN90 Primary Assembly

    Genomic

    1. NW_015865264.1 Reference Ntab-TN90 Primary Assembly

      Range
      15284..23410 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_016576800.1 → XP_016432286.1  serine/threonine-protein kinase 38-like

    RNA

    1. XR_001642080.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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