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    LOC109005666 1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1 [ Juglans regia (English walnut) ]

    Gene ID: 109005666, updated on 22-Oct-2023

    Summary

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    Gene symbol
    LOC109005666
    Gene description
    1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1
    Locus tag
    F2P56_014943
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Juglans regia
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
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    Genomic context

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    See LOC109005666 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    101 current Walnut 2.0 (GCF_001411555.2) 7 NC_049907.1 (18143811..18145548, complement)
    100 previous assembly wgs.5d (GCF_001411555.1) Unplaced Scaffold NW_017389308.1 (157258..158944, complement)

    Chromosome 7 - NC_049907.1Genomic Context describing neighboring genes Neighboring gene 40S ribosomal protein S29-like Neighboring gene uncharacterized LOC109005665 Neighboring gene uncharacterized mitochondrial protein AtMg00810-like Neighboring gene uncharacterized LOC109005668

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables 1,4-dihydroxy-2-naphthoyl-CoA thioesterase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in phylloquinone biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in peroxisome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Juglans regia Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Walnut 2.0 Primary Assembly

    Genomic

    1. NC_049907.1 Reference Walnut 2.0 Primary Assembly

      Range
      18143811..18145548 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_018984692.2 → XP_018840237.1  1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1

      UniProtKB/TrEMBL
      A0A2I4G8K7
      Conserved Domains (1) summary
      cl00509
      Location:7 → 160
      hot_dog; The hotdog fold was initially identified in the E. coli FabA (beta-hydroxydecanoyl-acyl carrier protein (ACP)-dehydratase) structure and subsequently in 4HBT (4-hydroxybenzoyl-CoA thioesterase) from Pseudomonas. A number of other seemingly unrelated ...
    Nucleotide Protein
    Heading Accession and Version

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