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    Hcf Host cell factor [ Anoplophora glabripennis (Asian longhorned beetle) ]

    Gene ID: 108912418, updated on 23-May-2024

    Summary

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    Gene symbol
    Hcf
    Gene description
    Host cell factor
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Anoplophora glabripennis
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Cucujiformia; Chrysomeloidea; Cerambycidae; Lamiinae; Lamiini; Anoplophora
    Also known as
    HCFC1
    Orthologs
    fruit fly all
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    Genomic context

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    See Hcf in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    101 current Agla_2.0 (GCF_000390285.2) Unplaced Scaffold NW_019416607.1 (339190..353412)
    100 previous assembly Agla_1.0 (GCF_000390285.1) Unplaced Scaffold NW_017373164.1 (338682..352705)

    NW_019416607.1Genomic Context describing neighboring genes Neighboring gene DNA-binding protein Ewg Neighboring gene Exocyst complex component Sec6 Neighboring gene gamma-aminobutyric acid type B receptor subunit 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transcription coactivator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in chromatin remodeling IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of histone methyltransferase complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    host cell factor 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Anoplophora glabripennis Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Agla_2.0 Primary Assembly

    Genomic

    1. NW_019416607.1 Reference Agla_2.0 Primary Assembly

      Range
      339190..353412
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_018717630.1 → XP_018573146.1  host cell factor 2 isoform X2

    2. XM_018717629.1 → XP_018573145.1  host cell factor 2 isoform X1

    Nucleotide Protein
    Heading Accession and Version

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