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    LOC108829842 uncharacterized LOC108829842 [ Raphanus sativus (radish) ]

    Gene ID: 108829842, updated on 14-Jun-2023

    Summary

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    Gene symbol
    LOC108829842
    Gene description
    uncharacterized LOC108829842
    Locus tag
    Rs2_09275
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Raphanus sativus
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
    Also known as
    GOLD
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    Genomic context

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    See LOC108829842 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    RS_2023_06 current ASM80110v3 (GCF_000801105.2) 3 NC_079513.1 (1625330..1629315, complement)
    100 previous assembly Rs1.0 (GCF_000801105.1) Unplaced Scaffold NW_017353259.1 (78960..82944, complement)

    Chromosome 3 - NC_079513.1Genomic Context describing neighboring genes Neighboring gene type III polyketide synthase C Neighboring gene probable WRKY transcription factor 62 Neighboring gene E3 ubiquitin-protein ligase HAKAI homolog Neighboring gene mechanosensitive ion channel protein 1, mitochondrial

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. De novo transcriptome analysis in radish (Raphanus sativus L.) and identification of critical genes involved in bolting and flowering. Nie S, et al. BMC Genomics, 2016 May 23. PMID 27216755, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein LOC108829842

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000801105.2-RS_2023_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM80110v3 Primary Assembly

    Genomic

    1. NC_079513.1 Reference ASM80110v3 Primary Assembly

      Range
      1625330..1629315 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_018603435.2 → XP_018458937.1  uncharacterized protein LOC108829842

      UniProtKB/TrEMBL
      A0A6J0LFV5
    Nucleotide Protein
    Heading Accession and Version

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