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    LAMA1 laminin subunit alpha 1 [ Nanorana parkeri ]

    Gene ID: 108784886, updated on 14-Mar-2024

    Summary

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    Gene symbol
    LAMA1
    Gene description
    laminin subunit alpha 1
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Nanorana parkeri
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Neobatrachia; Ranoidea; Dicroglossidae; Dicroglossinae; Nanorana
    Orthologs
    human mouse all
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    Genomic context

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    See LAMA1 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    63
    Annotation release Status Assembly Chr Location
    100 current ASM93562v1 (GCF_000935625.1) Unplaced Scaffold NW_017306275.1 (3111998..3272768, complement)

    NW_017306275.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L36-like Neighboring gene Rho GTPase activating protein 28 Neighboring gene leucine rich repeat containing 30 Neighboring gene uncharacterized LOC108784856 Neighboring gene protein tyrosine phosphatase receptor type M

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_017306275.1 Unplaced Scaffold Reference ASM93562v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables extracellular matrix structural constituent IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables signaling receptor binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in axon guidance IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in blood vessel morphogenesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in camera-type eye development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cell adhesion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of cell adhesion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of cell migration IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of embryonic development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in basement membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    laminin subunit alpha-1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Nanorana parkeri Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM93562v1 Primary Assembly

    Genomic

    1. NW_017306275.1 Reference ASM93562v1 Primary Assembly

      Range
      3111998..3272768 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_018553825.1 → XP_018409327.1  laminin subunit alpha-1

    Nucleotide Protein
    Heading Accession and Version

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