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    caps.L calcyphosine L homeolog [ Xenopus laevis (African clawed frog) ]

    Gene ID: 108712747, updated on 17-Aug-2024

    Summary

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    Official Symbol
    caps.L
    Official Full Name
    calcyphosine L homeolog
    Primary source
    Xenbase:XB-GENE-17342462
    Locus tag
    XELAEV_18006302mg
    See related
    EnsemblRapid:ENSXLAG00005015376
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Xenopus laevis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
    Also known as
    caps1
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    Genomic context

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    See caps.L in Genome Data Viewer
    Location:
    chromosome: 1L
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 1L NC_054371.1 (110869942..110878197)
    100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 1L NC_030724.1 (98821619..98829939)

    Chromosome 1L - NC_054371.1Genomic Context describing neighboring genes Neighboring gene NADH:ubiquinone oxidoreductase subunit A11 L homeolog Neighboring gene vimentin type intermediate filament associated coiled-coil protein L homeolog Neighboring gene RAN binding protein 3 L homeolog Neighboring gene solute carrier family 1 (high affinity aspartate/glutamate transporter), member 6 L homeolog

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    calcyphosin-like protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_laevis_v10.1 Primary Assembly

    Genomic

    1. NC_054371.1 Reference Xenopus_laevis_v10.1 Primary Assembly

      Range
      110869942..110878197
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_018255144.2 → XP_018110633.1  calcyphosin-like protein

      UniProtKB/TrEMBL
      A0A1L8HWQ8, A0A974DZ20, Q6GLR0
      Related
      ENSXLAP00005045042.1, ENSXLAT00005046141.1
    Nucleotide Protein Strain
    Heading Accession and Version

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    Molecular Biology Databases