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    LOC108480547 delta(12)-fatty-acid desaturase FAD2-like [ Gossypium arboreum ]

    Gene ID: 108480547, updated on 23-Nov-2023

    Summary

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    Gene symbol
    LOC108480547
    Gene description
    delta(12)-fatty-acid desaturase FAD2-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gossypium arboreum
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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    Genomic context

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    See LOC108480547 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2022_12 current ASM2569848v2 (GCF_025698485.1) 1 NC_069070.1 (67367906..67391052, complement)
    100 previous assembly Gossypium_arboreum_v1.0 (GCF_000612285.1) 7 NC_030670.1 (16206714..16229763)

    Chromosome 1 - NC_069070.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA R71 Neighboring gene squamosa promoter-binding-like protein 9 Neighboring gene uncharacterized LOC128280412 Neighboring gene small nucleolar RNA R71 Neighboring gene uncharacterized LOC128280630

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in lipid metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    delta(12)-fatty-acid desaturase FAD2-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_025698485.1-RS_

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM2569848v2 Primary Assembly

    Genomic

    1. NC_069070.1 Reference ASM2569848v2 Primary Assembly

      Range
      67367906..67391052 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_017783584.2 → XP_017639073.1  delta(12)-fatty-acid desaturase FAD2-like

      Conserved Domains (1) summary
      PLN02505
      Location:1 → 383
      PLN02505; omega-6 fatty acid desaturase
    Nucleotide Protein
    Heading Accession and Version

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