styxl1.L serine/threonine/tyrosine interacting-like 1 L homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: styxl1.L
Official Full Name: serine/threonine/tyrosine interacting-like 1 L homeolog
Primary source: Xenbase:XB-GENE-976852
Locus tag: XELAEV_18012687mg
See related: EnsemblRapid:ENSXLAG00005003965
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: styxl1
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Genomic context

Location:: chromosome: 2L

Exon count:: 10

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	2L	NC_054373.1 (97747641..97759717)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	2L	NC_030726.1 (92010135..92022211)

Chromosome 2L - NC_054373.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables protein phosphatase binding	IEA Inferred from Electronic Annotation more info
enables protein phosphatase inhibitor activity	IEA Inferred from Electronic Annotation more info
enables pseudophosphatase activity	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within negative regulation of stress granule assembly	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within positive regulation of intrinsic apoptotic signaling pathway	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in mitochondrion	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: serine/threonine/tyrosine interacting-like 1 L homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001112823.1 → NP_001106294.1 serine/threonine/tyrosine interacting-like 1 L homeolog

See identical proteins and their annotated locations for NP_001106294.1

Status: PROVISIONAL

Source sequence(s)

BC155900

UniProtKB/TrEMBL

A9JS34, Q6NTR2

Related

ENSXLAP00005011913.1, ENSXLAT00005012087.1

Conserved Domains (2) summary

cl00125
Location:33 → 120

RHOD; Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein. The cysteine containing enzymatically active version of the domain is also found in the Cdc25 class of protein phosphatases and a variety of proteins ...

cl21483
Location:142 → 279

PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...