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    GDE1 glycerophosphodiester phosphodiesterase 1 [ Oryctolagus cuniculus (rabbit) ]

    Gene ID: 100353916, updated on 8-Mar-2024

    Summary

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    Gene symbol
    GDE1
    Gene description
    glycerophosphodiester phosphodiesterase 1
    See related
    Ensembl:ENSOCUG00000003596
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryctolagus cuniculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus
    Orthologs
    human mouse all
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    Genomic context

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    See GDE1 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2023_02 current UM_NZW_1.0 (GCF_009806435.1) 6 NC_067379.1 (8685258..8699967)

    Chromosome 6 - NC_067379.1Genomic Context describing neighboring genes Neighboring gene VPS35 endosomal protein sorting factor like Neighboring gene centriolar coiled-coil protein 110 Neighboring gene transmembrane channel like 5 Neighboring gene transmembrane channel like 7

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_067379.1 Chromosome 6 Reference UM_NZW_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables phosphoric diester hydrolase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in lipid metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    glycerophosphodiester phosphodiesterase 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_009806435.1-RS_2023_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UM_NZW_1.0 Primary Assembly

    Genomic

    1. NC_067379.1 Reference UM_NZW_1.0 Primary Assembly

      Range
      8685258..8699967
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_008257779.3 → XP_008256001.1  glycerophosphodiester phosphodiesterase 1 isoform X2

      Conserved Domains (2) summary
      cd08573
      Location:68 → 292
      GDPD_GDE1; Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE1 and similar proteins
      pfam03009
      Location:70 → 275
      GDPD; Glycerophosphoryl diester phosphodiesterase family

    2. XM_002711771.4 → XP_002711817.1  glycerophosphodiester phosphodiesterase 1 isoform X1

      UniProtKB/TrEMBL
      G1SK10
      Related
      ENSOCUP00000003118.2
      Conserved Domains (2) summary
      cd08573
      Location:68 → 323
      GDPD_GDE1; Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE1 and similar proteins
      pfam03009
      Location:70 → 306
      GDPD; Glycerophosphoryl diester phosphodiesterase family

    3. XM_017342482.2 → XP_017197971.1  glycerophosphodiester phosphodiesterase 1 isoform X3

    Nucleotide Protein
    Heading Accession and Version

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