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    LOC107783157 probable transcription factor KAN2 [ Nicotiana tabacum (common tobacco) ]

    Gene ID: 107783157, updated on 28-Dec-2023

    Summary

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    Gene symbol
    LOC107783157
    Gene description
    probable transcription factor KAN2
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Nicotiana tabacum
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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    Genomic context

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    See LOC107783157 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    100 current Ntab-TN90 (GCF_000715135.1) Unplaced Scaffold NW_015909403.1 (50355..55839, complement)

    NW_015909403.1Genomic Context describing neighboring genes Neighboring gene inactive poly [ADP-ribose] polymerase RCD1-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_015909403.1 Unplaced Scaffold Reference Ntab-TN90 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables transcription cis-regulatory region binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in abaxial cell fate specification IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    probable transcription factor KAN2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Nicotiana tabacum Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Ntab-TN90 Primary Assembly

    Genomic

    1. NW_015909403.1 Reference Ntab-TN90 Primary Assembly

      Range
      50355..55839 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_016604131.1 → XP_016459617.1  probable transcription factor KAN2 isoform X4

      UniProtKB/TrEMBL
      A0A1S3Z5X7
      Conserved Domains (1) summary
      TIGR01557
      Location:224 → 277
      myb_SHAQKYF; myb-like DNA-binding domain, SHAQKYF class

    2. XM_016604129.1 → XP_016459615.1  probable transcription factor KAN2 isoform X2

      UniProtKB/TrEMBL
      A0A1S3Z561
      Conserved Domains (1) summary
      TIGR01557
      Location:224 → 277
      myb_SHAQKYF; myb-like DNA-binding domain, SHAQKYF class

    3. XM_016604130.1 → XP_016459616.1  probable transcription factor KAN2 isoform X3

      UniProtKB/TrEMBL
      A0A1S3Z5E6
      Conserved Domains (1) summary
      TIGR01557
      Location:224 → 277
      myb_SHAQKYF; myb-like DNA-binding domain, SHAQKYF class

    4. XM_016604128.1 → XP_016459614.1  probable transcription factor KAN2 isoform X1

      UniProtKB/TrEMBL
      A0A1S3Z5I7
      Conserved Domains (1) summary
      TIGR01557
      Location:224 → 277
      myb_SHAQKYF; myb-like DNA-binding domain, SHAQKYF class
    Nucleotide Protein
    Heading Accession and Version

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