U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    LOC107608072 zinc finger protein MAGPIE-like [ Arachis ipaensis ]

    Gene ID: 107608072, updated on 21-Dec-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC107608072
    Gene description
    zinc finger protein MAGPIE-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Arachis ipaensis
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; dalbergioids sensu lato; Dalbergieae; Pterocarpus clade; Arachis
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC107608072 in Genome Data Viewer
    Location:
    chromosome: B07
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    101 current Araip1.1 (GCF_000816755.2) B07 NC_029791.2 (42344165..42347441, complement)
    100 previous assembly Araip1.0 (GCF_000816755.1) B07 NC_029791.1 (42225365..42228466, complement)

    Chromosome B07 - NC_029791.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107609491 Neighboring gene uncharacterized LOC107608210 Neighboring gene uncharacterized LOC110264583 Neighboring gene uncharacterized LOC110264584 Neighboring gene uncharacterized LOC107608581

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    zinc finger protein MAGPIE-like

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Arachis ipaensis Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Araip1.1

    Genomic

    1. NC_029791.2 Reference Araip1.1

      Range
      42344165..42347441 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_016309963.2 → XP_016165449.1  zinc finger protein MAGPIE-like

      Conserved Domains (1) summary
      sd00017
      Location:65 → 85
      ZF_C2H2; C2H2 Zn finger [structural motif]
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases