U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    LOC109797497 glutaredoxin-C13 [ Cajanus cajan (pigeon pea) ]

    Gene ID: 109797497, updated on 21-Dec-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC109797497
    Gene description
    glutaredoxin-C13
    Locus tag
    KK1_010882
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cajanus cajan
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Cajanus
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC109797497 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    101 current C.cajan_V1.0 (GCF_000340665.1) 3 NC_033806.1 (25652232..25653009)

    Chromosome 3 - NC_033806.1Genomic Context describing neighboring genes Neighboring gene deubiquitinase OTUD6B Neighboring gene glutaredoxin-C11 Neighboring gene membrane-anchored ubiquitin-fold protein 3 Neighboring gene E3 ubiquitin-protein ligase MIEL1

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_033806.1 Chromosome 3 Reference C.cajan_V1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Development of genic-SSR markers by deep transcriptome sequencing in pigeonpea [Cajanus cajan (L.) Millspaugh]. Dutta S, et al. BMC Plant Biol, 2011 Jan 20. PMID 21251263, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    glutaredoxin-C13

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Cajanus cajan Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference C.cajan_V1.0 Primary Assembly

    Genomic

    1. NC_033806.1 Reference C.cajan_V1.0 Primary Assembly

      Range
      25652232..25653009
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_020357549.2 → XP_020213138.1  glutaredoxin-C13

      UniProtKB/TrEMBL
      A0A151TX38
      Conserved Domains (1) summary
      TIGR02189
      Location:4 → 100
      GlrX-like_plant; Glutaredoxin-like family

    2. XM_020357551.2 → XP_020213140.1  glutaredoxin-C13

      UniProtKB/TrEMBL
      A0A151TX38
      Conserved Domains (1) summary
      TIGR02189
      Location:4 → 100
      GlrX-like_plant; Glutaredoxin-like family
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases