U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    KDM8 lysine demethylase 8 [ Coturnix japonica (Japanese quail) ]

    Gene ID: 107320716, updated on 14-Mar-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    KDM8
    Gene description
    lysine demethylase 8
    See related
    Ensembl:ENSCJPG00005010249
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Coturnix japonica
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Perdicinae; Coturnix
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See KDM8 in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    101 current Coturnix japonica 2.1 (GCF_001577835.2) 14 NC_029529.1 (7172805..7176397)

    Chromosome 14 - NC_029529.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC116654094 Neighboring gene uncharacterized LOC107320718 Neighboring gene NSE1 homolog, SMC5-SMC6 complex component Neighboring gene interleukin 4 receptor Neighboring gene interleukin 21 receptor

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_029529.1 Chromosome 14 Reference Coturnix japonica 2.1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables histone H3K36 demethylase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    bifunctional peptidase and arginyl-hydroxylase JMJD5

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Coturnix japonica Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Coturnix japonica 2.1 Primary Assembly

    Genomic

    1. NC_029529.1 Reference Coturnix japonica 2.1 Primary Assembly

      Range
      7172805..7176397
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015876888.2 → XP_015732374.1  bifunctional peptidase and arginyl-hydroxylase JMJD5

      UniProtKB/TrEMBL
      A0A8C2TDE4
      Related
      ENSCJPP00005012010.1, ENSCJPT00005017468.1
      Conserved Domains (1) summary
      pfam13621
      Location:179 → 401
      Cupin_8; Cupin-like domain
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.