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    LOC4334851 uncharacterized LOC4334851 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4334851, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4334851
    Gene description
    uncharacterized LOC4334851
    Locus tag
    OSNPB_030858400
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4334851 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 3 NC_089037.1 (37207683..37211917)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 3 NC_029258.1 (36228698..36232912)

    Chromosome 3 - NC_089037.1Genomic Context describing neighboring genes Neighboring gene protein EXPORTIN 1A Neighboring gene uncharacterized LOC4334850 Neighboring gene protein PSK SIMULATOR 1 Neighboring gene uncharacterized LOC4334853 Neighboring gene protein DETOXIFICATION 56

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein LOC4334851
    Names
    Os03g0858400
    transducin beta-like protein 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089037.1 Reference ASM3414082v1 Primary Assembly

      Range
      37207683..37211917
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015777728.3 → XP_015633214.1  uncharacterized protein LOC4334851

      UniProtKB/TrEMBL
      A2XPA6, A3APY2, Q84M69
      Conserved Domains (2) summary
      sd00039
      Location:257 → 301
      7WD40; WD40 repeat [structural motif]
      cl29593
      Location:88 → 436
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    Nucleotide Protein
    Heading Accession and Version

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