U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Nucleotide

    • Showing Current items.

    ehbp1 EH domain binding protein 1 [ Cyprinodon variegatus (sheepshead minnow) ]

    Gene ID: 107094035, updated on 14-Mar-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    ehbp1
    Gene description
    EH domain binding protein 1
    See related
    Ensembl:ENSCVAG00000000800
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cyprinodon variegatus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Cyprinodontidae; Cyprinodon
    Orthologs
    human zebrafish all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See ehbp1 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    26
    Annotation release Status Assembly Chr Location
    100 current C_variegatus-1.0 (GCF_000732505.1) Unplaced Scaffold NW_015150911.1 (308278..491439)

    NW_015150911.1Genomic Context describing neighboring genes Neighboring gene protein FAM161A-like Neighboring gene UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2b Neighboring gene orthodenticle homeobox 1 Neighboring gene WD repeat containing planar cell polarity effector

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NW_015150911.1 Unplaced Scaffold Reference C_variegatus-1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    EH domain-binding protein 1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Cyprinodon variegatus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference C_variegatus-1.0 Primary Assembly

    Genomic

    1. NW_015150911.1 Reference C_variegatus-1.0 Primary Assembly

      Range
      308278..491439
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015389429.1 → XP_015244915.1  EH domain-binding protein 1 isoform X2

      UniProtKB/TrEMBL
      A0A3Q2CEI3
      Conserved Domains (3) summary
      pfam00307
      Location:485 → 581
      CH; Calponin homology (CH) domain
      pfam10358
      Location:12 → 165
      NT-C2; N-terminal C2 in EEIG1 and EHBP1 proteins
      pfam12130
      Location:1132 → 1272
      DUF3585; Protein of unknown function (DUF3585)

    2. XM_015389428.1 → XP_015244914.1  EH domain-binding protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A3Q2CEI3, A0A3Q2DTF7
      Related
      ENSCVAP00000022159.1, ENSCVAT00000009979.1
      Conserved Domains (3) summary
      pfam00307
      Location:485 → 581
      CH; Calponin homology (CH) domain
      pfam10358
      Location:12 → 165
      NT-C2; N-terminal C2 in EEIG1 and EHBP1 proteins
      pfam12130
      Location:1133 → 1273
      DUF3585; Protein of unknown function (DUF3585)

    3. XM_015389431.1 → XP_015244917.1  EH domain-binding protein 1 isoform X4

      UniProtKB/TrEMBL
      A0A3Q2CEI3, A0A3Q2CES8
      Related
      ENSCVAP00000003452.1, ENSCVAT00000010028.1
      Conserved Domains (3) summary
      pfam00307
      Location:485 → 581
      CH; Calponin homology (CH) domain
      pfam10358
      Location:12 → 165
      NT-C2; N-terminal C2 in EEIG1 and EHBP1 proteins
      pfam12130
      Location:1050 → 1190
      DUF3585; Protein of unknown function (DUF3585)

    4. XM_015389430.1 → XP_015244916.1  EH domain-binding protein 1 isoform X3

      UniProtKB/TrEMBL
      A0A3Q2CEI3, A0A3Q2CEL5
      Related
      ENSCVAP00000003468.1, ENSCVAT00000009998.1
      Conserved Domains (3) summary
      pfam00307
      Location:445 → 541
      CH; Calponin homology (CH) domain
      pfam10358
      Location:12 → 165
      NT-C2; N-terminal C2 in EEIG1 and EHBP1 proteins
      pfam12130
      Location:1093 → 1233
      DUF3585; Protein of unknown function (DUF3585)

    5. XM_015389433.1 → XP_015244919.1  EH domain-binding protein 1 isoform X5

      UniProtKB/TrEMBL
      A0A3Q2CEI3
      Related
      ENSCVAP00000003426.1, ENSCVAT00000010069.1
      Conserved Domains (3) summary
      pfam00307
      Location:445 → 541
      CH; Calponin homology (CH) domain
      pfam10358
      Location:12 → 165
      NT-C2; N-terminal C2 in EEIG1 and EHBP1 proteins
      pfam12130
      Location:1010 → 1150
      DUF3585; Protein of unknown function (DUF3585)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.