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    RN7SKP43 RN7SK pseudogene 43 [ Homo sapiens (human) ]

    Gene ID: 106481806, updated on 17-Sep-2024

    Summary

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    Official Symbol
    RN7SKP43provided by HGNC
    Official Full Name
    RN7SK pseudogene 43provided by HGNC
    Primary source
    HGNC:HGNC:45767
    See related
    Ensembl:ENSG00000251982 AllianceGenome:HGNC:45767
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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    Genomic context

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    See RN7SKP43 in Genome Data Viewer
    Location:
    2q35
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (217251556..217251875)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (217734001..217734320)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (218116279..218116598)

    Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124907980 Neighboring gene Sharpr-MPRA regulatory region 14920 Neighboring gene uncharacterized LOC105373872 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr2:218073575-218074414 Neighboring gene ReSE screen-validated silencer GRCh37_chr2:218082948-218083116 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 17104 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr2:218088086-218089285 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr2:218125637-218126836 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr2:218134772-218135400 Neighboring gene H3K27ac hESC enhancer GRCh37_chr2:218156138-218156638 Neighboring gene H3K27ac hESC enhancer GRCh37_chr2:218156639-218157139 Neighboring gene DIRC3 antisense RNA 1 Neighboring gene Sharpr-MPRA regulatory region 8768 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:218199087-218199799 Neighboring gene disrupted in renal carcinoma 3 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr2:218234719-218235918 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_56988 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_56989 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_56990 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_56991 Neighboring gene uncharacterized LOC124907981

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    General gene information

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    Other Names

    • RNA, 7SK small nuclear pseudogene 43

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_044027.1 

      Range
      101..420
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      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

      Range
      217251556..217251875
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060926.1 Alternate T2T-CHM13v2.0

      Range
      217734001..217734320
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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