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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001039086.1 → NP_001034175.1 rap guanine nucleotide exchange factor 1 isoform 2
See identical proteins and their annotated locations for NP_001034175.1
Status: VALIDATED
- Source sequence(s)
-
AK077034, AK147470, AK147696
- Consensus CDS
-
CCDS38092.1
- UniProtKB/TrEMBL
-
Q3UGX8
- Related
- ENSMUSP00000088680.6, ENSMUST00000091146.12
- Conserved Domains (2) summary
-
- smart00147
Location:977 → 1206
- RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
- smart00229
Location:829 → 970
- RasGEFN; Guanine nucleotide exchange factor for Ras-like GTPases; N-terminal motif
-
NM_001039087.2 → NP_001034176.1 rap guanine nucleotide exchange factor 1 isoform 1
See identical proteins and their annotated locations for NP_001034176.1
Status: VALIDATED
- Source sequence(s)
-
AL845323
- Consensus CDS
-
CCDS38091.1
- UniProtKB/TrEMBL
-
Q3UHC1
- Related
- ENSMUSP00000092703.5, ENSMUST00000095087.11
- Conserved Domains (2) summary
-
- smart00147
Location:983 → 1212
- RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
- smart00229
Location:835 → 976
- RasGEFN; Guanine nucleotide exchange factor for Ras-like GTPases; N-terminal motif
-
NM_001362702.1 → NP_001349631.1 rap guanine nucleotide exchange factor 1 isoform 4
Status: VALIDATED
- Source sequence(s)
-
AK077034, AK147468, BC129881
- Consensus CDS
-
CCDS89458.1
- UniProtKB/TrEMBL
- A1L338, E0CXV1
- Related
- ENSMUSP00000121615.4, ENSMUST00000147755.10
- Conserved Domains (4) summary
-
- smart00147
Location:944 → 1173
- RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
- smart00229
Location:796 → 937
- RasGEFN; Guanine nucleotide exchange factor for Ras-like GTPases; N-terminal motif
- cl26464
Location:188 → 298
- Atrophin-1; Atrophin-1 family
- cl27601
Location:663 → 778
- Pectinesterase; Pectinesterase
-
NM_054050.2 → NP_473391.1 rap guanine nucleotide exchange factor 1 isoform 3
See identical proteins and their annotated locations for NP_473391.1
Status: VALIDATED
- Source sequence(s)
-
AF348669, AK077034, AK147470
- Consensus CDS
-
CCDS15854.1
- UniProtKB/TrEMBL
-
Q91ZZ2
- Related
- ENSMUSP00000099936.5, ENSMUST00000102872.11
- Conserved Domains (2) summary
-
- smart00147
Location:845 → 1074
- RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
- smart00229
Location:697 → 838
- RasGEFN; Guanine nucleotide exchange factor for Ras-like GTPases; N-terminal motif
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000068.8 Reference GRCm39 C57BL/6J
- Range
-
29509732..29630376
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_006497583.2 → XP_006497646.1 rap guanine nucleotide exchange factor 1 isoform X2
- Conserved Domains (4) summary
-
- smart00147
Location:1015 → 1244
- RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
- smart00229
Location:867 → 1008
- RasGEFN; Guanine nucleotide exchange factor for Ras-like GTPases; N-terminal motif
- PHA03247
Location:226 → 336
- PHA03247; large tegument protein UL36; Provisional
- PHA03307
Location:677 → 877
- PHA03307; transcriptional regulator ICP4; Provisional
-
XM_030246484.1 → XP_030102344.1 rap guanine nucleotide exchange factor 1 isoform X17
- Conserved Domains (3) summary
-
- smart00147
Location:897 → 1126
- RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
- smart00229
Location:749 → 890
- RasGEFN; Guanine nucleotide exchange factor for Ras-like GTPases; N-terminal motif
- PHA03247
Location:226 → 336
- PHA03247; large tegument protein UL36; Provisional
-
XM_036157277.1 → XP_036013170.1 rap guanine nucleotide exchange factor 1 isoform X4
- Conserved Domains (4) summary
-
- smart00147
Location:1014 → 1243
- RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
- smart00229
Location:866 → 1007
- RasGEFN; Guanine nucleotide exchange factor for Ras-like GTPases; N-terminal motif
- PHA03247
Location:226 → 336
- PHA03247; large tegument protein UL36; Provisional
- PHA03307
Location:676 → 876
- PHA03307; transcriptional regulator ICP4; Provisional
-
XM_036157284.1 → XP_036013177.1 rap guanine nucleotide exchange factor 1 isoform X8
- Conserved Domains (4) summary
-
- smart00147
Location:982 → 1211
- RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
- smart00229
Location:834 → 975
- RasGEFN; Guanine nucleotide exchange factor for Ras-like GTPases; N-terminal motif
- PLN02217
Location:701 → 816
- PLN02217; probable pectinesterase/pectinesterase inhibitor
- PHA03247
Location:226 → 336
- PHA03247; large tegument protein UL36; Provisional
-
XM_036157298.1 → XP_036013191.1 rap guanine nucleotide exchange factor 1 isoform X13
- Conserved Domains (3) summary
-
- smart00147
Location:945 → 1174
- RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
- smart00229
Location:797 → 938
- RasGEFN; Guanine nucleotide exchange factor for Ras-like GTPases; N-terminal motif
- PHA03247
Location:191 → 751
- PHA03247; large tegument protein UL36; Provisional
-
XM_030246482.1 → XP_030102342.1 rap guanine nucleotide exchange factor 1 isoform X11
- Conserved Domains (4) summary
-
- smart00147
Location:976 → 1205
- RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
- smart00229
Location:828 → 969
- RasGEFN; Guanine nucleotide exchange factor for Ras-like GTPases; N-terminal motif
- PHA03247
Location:188 → 298
- PHA03247; large tegument protein UL36; Provisional
- PHA03307
Location:638 → 838
- PHA03307; transcriptional regulator ICP4; Provisional
-
XM_030246487.1 → XP_030102347.1 rap guanine nucleotide exchange factor 1 isoform X22
- Conserved Domains (3) summary
-
- smart00147
Location:807 → 1036
- RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
- smart00229
Location:659 → 800
- RasGEFN; Guanine nucleotide exchange factor for Ras-like GTPases; N-terminal motif
- PHA03247
Location:188 → 298
- PHA03247; large tegument protein UL36; Provisional
-
XM_030246485.2 → XP_030102345.1 rap guanine nucleotide exchange factor 1 isoform X19
- Conserved Domains (4) summary
-
- smart00147
Location:886 → 1115
- RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
- smart00229
Location:738 → 879
- RasGEFN; Guanine nucleotide exchange factor for Ras-like GTPases; N-terminal motif
- PHA03247
Location:97 → 207
- PHA03247; large tegument protein UL36; Provisional
- pfam05110
Location:566 → 704
- AF-4; AF-4 proto-oncoprotein
-
XM_030246488.2 → XP_030102348.1 rap guanine nucleotide exchange factor 1 isoform X23
- Conserved Domains (3) summary
-
- smart00147
Location:768 → 997
- RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
- smart00229
Location:620 → 761
- RasGEFN; Guanine nucleotide exchange factor for Ras-like GTPases; N-terminal motif
- PHA03247
Location:97 → 207
- PHA03247; large tegument protein UL36; Provisional
-
XM_036157280.1 → XP_036013173.1 rap guanine nucleotide exchange factor 1 isoform X6
- Conserved Domains (4) summary
-
- smart00147
Location:984 → 1213
- RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
- smart00229
Location:836 → 977
- RasGEFN; Guanine nucleotide exchange factor for Ras-like GTPases; N-terminal motif
- PHA03247
Location:195 → 305
- PHA03247; large tegument protein UL36; Provisional
- PHA03307
Location:646 → 846
- PHA03307; transcriptional regulator ICP4; Provisional
-
XM_006497582.4 → XP_006497645.1 rap guanine nucleotide exchange factor 1 isoform X1
- Conserved Domains (4) summary
-
- smart00147
Location:1016 → 1245
- RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
- smart00229
Location:868 → 1009
- RasGEFN; Guanine nucleotide exchange factor for Ras-like GTPases; N-terminal motif
- PHA03247
Location:227 → 337
- PHA03247; large tegument protein UL36; Provisional
- PHA03307
Location:678 → 878
- PHA03307; transcriptional regulator ICP4; Provisional
-
XM_006497585.5 → XP_006497648.1 rap guanine nucleotide exchange factor 1 isoform X5
- Conserved Domains (3) summary
-
- smart00147
Location:984 → 1213
- RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
- smart00229
Location:836 → 977
- RasGEFN; Guanine nucleotide exchange factor for Ras-like GTPases; N-terminal motif
- PHA03247
Location:230 → 790
- PHA03247; large tegument protein UL36; Provisional
-
XM_006497589.4 → XP_006497652.1 rap guanine nucleotide exchange factor 1 isoform X16
- Conserved Domains (3) summary
-
- smart00147
Location:898 → 1127
- RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
- smart00229
Location:750 → 891
- RasGEFN; Guanine nucleotide exchange factor for Ras-like GTPases; N-terminal motif
- PHA03247
Location:227 → 337
- PHA03247; large tegument protein UL36; Provisional
-
XM_006497584.4 → XP_006497647.1 rap guanine nucleotide exchange factor 1 isoform X3
- Conserved Domains (4) summary
-
- smart00147
Location:1015 → 1244
- RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
- smart00229
Location:867 → 1008
- RasGEFN; Guanine nucleotide exchange factor for Ras-like GTPases; N-terminal motif
- PHA03247
Location:227 → 337
- PHA03247; large tegument protein UL36; Provisional
- PHA03307
Location:677 → 877
- PHA03307; transcriptional regulator ICP4; Provisional
-
XM_030246481.2 → XP_030102341.1 rap guanine nucleotide exchange factor 1 isoform X7
- Conserved Domains (4) summary
-
- smart00147
Location:983 → 1212
- RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
- smart00229
Location:835 → 976
- RasGEFN; Guanine nucleotide exchange factor for Ras-like GTPases; N-terminal motif
- PLN02217
Location:702 → 817
- PLN02217; probable pectinesterase/pectinesterase inhibitor
- PHA03247
Location:227 → 337
- PHA03247; large tegument protein UL36; Provisional
-
XM_006497590.4 → XP_006497653.1 rap guanine nucleotide exchange factor 1 isoform X18
- Conserved Domains (3) summary
-
- smart00147
Location:897 → 1126
- RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
- smart00229
Location:749 → 890
- RasGEFN; Guanine nucleotide exchange factor for Ras-like GTPases; N-terminal motif
- PHA03247
Location:227 → 337
- PHA03247; large tegument protein UL36; Provisional
-
XM_006497587.5 → XP_006497650.1 rap guanine nucleotide exchange factor 1 isoform X12
- Conserved Domains (4) summary
-
- smart00147
Location:964 → 1193
- RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
- smart00229
Location:816 → 957
- RasGEFN; Guanine nucleotide exchange factor for Ras-like GTPases; N-terminal motif
- PHA03247
Location:227 → 337
- PHA03247; large tegument protein UL36; Provisional
- pfam05110
Location:644 → 782
- AF-4; AF-4 proto-oncoprotein
-
XM_036157299.1 → XP_036013192.1 rap guanine nucleotide exchange factor 1 isoform X15
- Conserved Domains (3) summary
-
- smart00147
Location:932 → 1161
- RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
- smart00229
Location:784 → 925
- RasGEFN; Guanine nucleotide exchange factor for Ras-like GTPases; N-terminal motif
- PHA03247
Location:228 → 738
- PHA03247; large tegument protein UL36; Provisional
-
XM_006497592.4 → XP_006497655.1 rap guanine nucleotide exchange factor 1 isoform X20
- UniProtKB/TrEMBL
-
A0A5F8MPI9
- Related
- ENSMUSP00000158995.2, ENSMUST00000238899.2
- Conserved Domains (3) summary
-
- smart00147
Location:846 → 1075
- RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
- smart00229
Location:698 → 839
- RasGEFN; Guanine nucleotide exchange factor for Ras-like GTPases; N-terminal motif
- PHA03247
Location:227 → 337
- PHA03247; large tegument protein UL36; Provisional
-
XM_006497586.5 → XP_006497649.1 rap guanine nucleotide exchange factor 1 isoform X9
- Conserved Domains (4) summary
-
- smart00147
Location:978 → 1207
- RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
- smart00229
Location:830 → 971
- RasGEFN; Guanine nucleotide exchange factor for Ras-like GTPases; N-terminal motif
- PHA03247
Location:189 → 299
- PHA03247; large tegument protein UL36; Provisional
- PHA03307
Location:640 → 840
- PHA03307; transcriptional regulator ICP4; Provisional
-
XM_036157288.1 → XP_036013181.1 rap guanine nucleotide exchange factor 1 isoform X10
- Conserved Domains (4) summary
-
- smart00147
Location:977 → 1206
- RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
- smart00229
Location:829 → 970
- RasGEFN; Guanine nucleotide exchange factor for Ras-like GTPases; N-terminal motif
- PHA03247
Location:189 → 299
- PHA03247; large tegument protein UL36; Provisional
- PHA03307
Location:639 → 839
- PHA03307; transcriptional regulator ICP4; Provisional
-
XM_030246483.2 → XP_030102343.1 rap guanine nucleotide exchange factor 1 isoform X14
- Conserved Domains (4) summary
-
- smart00147
Location:945 → 1174
- RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
- smart00229
Location:797 → 938
- RasGEFN; Guanine nucleotide exchange factor for Ras-like GTPases; N-terminal motif
- PLN02217
Location:664 → 779
- PLN02217; probable pectinesterase/pectinesterase inhibitor
- PHA03247
Location:189 → 299
- PHA03247; large tegument protein UL36; Provisional
-
XM_036157304.1 → XP_036013197.1 rap guanine nucleotide exchange factor 1 isoform X21
- Conserved Domains (3) summary
-
- smart00147
Location:808 → 1037
- RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
- smart00229
Location:660 → 801
- RasGEFN; Guanine nucleotide exchange factor for Ras-like GTPases; N-terminal motif
- PHA03247
Location:189 → 299
- PHA03247; large tegument protein UL36; Provisional