U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Nucleotide

    • Showing Current items.

    CHRNE cholinergic receptor nicotinic epsilon subunit [ Cercocebus atys (sooty mangabey) ]

    Gene ID: 105583452, updated on 13-Mar-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    CHRNE
    Gene description
    cholinergic receptor nicotinic epsilon subunit
    See related
    Ensembl:ENSCATG00000042709
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cercocebus atys
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Cercocebus
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Location:
    chromosome: Un
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    100 current Caty_1.0 (GCF_000955945.1) Unplaced Scaffold NW_012000250.1 (11049658..11065436)

    NW_012000250.1Genomic Context describing neighboring genes Neighboring gene ring finger protein 167 Neighboring gene solute carrier family 25 member 11 Neighboring gene glycoprotein Ib platelet subunit alpha Neighboring gene chromosome unknown open reading frame, human C17orf107 Neighboring gene misshapen like kinase 1 Neighboring gene uncharacterized LOC105584484 Neighboring gene phospholipase D2

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NW_012000250.1 Unplaced Scaffold Reference Caty_1.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables acetylcholine-gated monoatomic cation-selective channel activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transmembrane signaling receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in chemical synaptic transmission IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in monoatomic ion transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in nervous system process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of membrane potential IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in neuron projection IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in postsynaptic membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in synapse IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    acetylcholine receptor subunit epsilon

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Cercocebus atys Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Caty_1.0

    Genomic

    1. NW_012000250.1 Reference Caty_1.0

      Range
      11049658..11065436
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_012055265.1 → XP_011910655.1  acetylcholine receptor subunit epsilon isoform X3

      Conserved Domains (1) summary
      pfam02932
      Location:1 → 162
      Neur_chan_memb; Neurotransmitter-gated ion-channel transmembrane region

    2. XM_012055248.1 → XP_011910638.1  acetylcholine receptor subunit epsilon isoform X1

      UniProtKB/TrEMBL
      A0A2K5NSH0
      Related
      ENSCATP00000040271.1, ENSCATT00000064591.1
      Conserved Domains (3) summary
      TIGR00860
      Location:21 → 475
      LIC; Cation transporter family protein
      pfam02931
      Location:24 → 240
      Neur_chan_LBD; Neurotransmitter-gated ion-channel ligand binding domain
      pfam02932
      Location:247 → 474
      Neur_chan_memb; Neurotransmitter-gated ion-channel transmembrane region

    3. XM_012055258.1 → XP_011910648.1  acetylcholine receptor subunit epsilon isoform X2

      Conserved Domains (3) summary
      TIGR00860
      Location:21 → 460
      LIC; Cation transporter family protein
      pfam02931
      Location:24 → 225
      Neur_chan_LBD; Neurotransmitter-gated ion-channel ligand binding domain
      pfam02932
      Location:232 → 459
      Neur_chan_memb; Neurotransmitter-gated ion-channel transmembrane region
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.