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    SJAG_00882 pescadillo-family BRCT domain-containing protein [ Schizosaccharomyces japonicus yFS275 ]

    Gene ID: 7051974, updated on 18-Sep-2024

    Summary

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    Gene symbol
    SJAG_00882
    Gene description
    pescadillo-family BRCT domain-containing protein
    Locus tag
    SJAG_00882
    See related
    FungiDB:SJAG_00882; VEuPathDB:SJAG_00882
    Gene type
    protein coding
    RNA name
    pescadillo-family BRCT domain-containing protein
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces japonicus yFS275 (strain: yFS275)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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    Genomic context

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    See SJAG_00882 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    3

    NW_011627860.1Genomic Context describing neighboring genes Neighboring gene MCM complex subunit Mcm7 Neighboring gene nucleolar protein Dnt1 Neighboring gene aspartate kinase Neighboring gene inositol polyphosphate phosphatase Neighboring gene U3 snoRNP protein Utp4

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_011627860.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Comparative functional genomics of the fission yeasts. Rhind N, et al. Science, 2011 May 20. PMID 21511999, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by JaponicusDB

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in assembly of large subunit precursor of preribosome IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    part_of PeBoW complex IEA
    Inferred from Electronic Annotation
    more info
    		  
    is_active_in nucleolus IEA
    Inferred from Electronic Annotation
    more info
    		  
    is_active_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		  
    part_of preribosome IEA
    Inferred from Electronic Annotation
    more info
    		  
    part_of preribosome, large subunit precursor IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Names
    pescadillo-family BRCT domain-containing protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_011627860.1 Reference assembly

      Range
      2450268..2452552
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002172115.2 → XP_002172151.1  pescadillo-family BRCT domain-containing protein [Schizosaccharomyces japonicus yFS275]

      See identical proteins and their annotated locations for XP_002172151.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      B6JWV7
      Conserved Domains (3) summary
      COG5163
      Location:2 → 610
      NOP7; Protein required for biogenesis of the 60S ribosomal subunit [Translation, ribosomal structure and biogenesis]
      pfam06732
      Location:8 → 276
      Pescadillo_N; Pescadillo N-terminus
      pfam16589
      Location:354 → 440
      BRCT_2; BRCT domain, a BRCA1 C-terminus domain
    Nucleotide Protein
    Heading Accession and Version

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