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    FEN12 fatty acid elongase [ Candida albicans SC5314 ]

    Gene ID: 3637404, updated on 30-Nov-2023

    Summary

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    Gene symbol
    FEN12
    Gene description
    fatty acid elongase
    Locus tag
    CAALFM_C203230CA
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Candida albicans SC5314 (strain: SC5314, nat-host: Homo sapiens, culture-collection: ATCC:MYA-2876)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Candida/Lodderomyces clade; Candida
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    Genomic context

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    See FEN12 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    1
    Sequence:
    Chromosome: 2; NC_032090.1 (663649..664527, complement)

    Chromosome 2 - NC_032090.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Stp4p Neighboring gene Rho family guanine nucleotide exchange factor Neighboring gene Avt7p

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_032090.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Assembly of a phased diploid Candida albicans genome facilitates allele-specific measurements and provides a simple model for repeat and indel structure. Muzzey D, et al. Genome Biol, 2013. PMID 24025428, Free PMC Article
    2. Assembly of the Candida albicans genome into sixteen supercontigs aligned on the eight chromosomes. van het Hoog M, et al. Genome Biol, 2007. PMID 17419877, Free PMC Article
    3. The diploid genome sequence of Candida albicans. Jones T, et al. Proc Natl Acad Sci U S A, 2004 May 11. PMID 15123810, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables fatty acid elongase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in fatty acid elongation, monounsaturated fatty acid IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in fatty acid elongation, polyunsaturated fatty acid IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in fatty acid elongation, saturated fatty acid IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in sphingolipid biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in very long-chain fatty acid biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    fatty acid elongase
    XP_721027.1
    • Putative protein with a predicted role in the elongation of fatty acids; amphotericin B, caspofungin repressed

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_032090.1 Reference assembly

      Range
      663649..664527 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_715934.1 → XP_721027.1  fatty acid elongase [Candida albicans SC5314]

      See identical proteins and their annotated locations for XP_721027.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A1D8PGU2, A0A8H6BUD1, C4YJS1
      Conserved Domains (1) summary
      pfam01151
      Location:74 → 287
      ELO; GNS1/SUR4 family
    Nucleotide Protein
    Heading Accession and Version

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