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    LOC123064252 heat stress transcription factor A-4d-like [ Triticum aestivum (bread wheat) ]

    Gene ID: 123064252, updated on 30-Nov-2023

    Summary

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    Gene symbol
    LOC123064252
    Gene description
    heat stress transcription factor A-4d-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Triticum aestivum
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
    Also known as
    HsfA4c
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    Genomic context

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    See LOC123064252 in Genome Data Viewer
    Location:
    chromosome: 1A
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    100 current IWGSC CS RefSeq v2.1 (GCF_018294505.1) 1A NC_057794.1 (537017974..537020351)

    Chromosome 1A - NC_057794.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC123179883 Neighboring gene uncharacterized LOC123064223 Neighboring gene serine/threonine protein kinase OSK1 Neighboring gene WD repeat-containing protein 55-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_057794.1 Chromosome 1A Reference IWGSC CS RefSeq v2.1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    heat stress transcription factor A-4d-like
    Names
    heat shock factor A4c

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Triticum aestivum Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference IWGSC CS RefSeq v2.1 Primary Assembly

    Genomic

    1. NC_057794.1 Reference IWGSC CS RefSeq v2.1 Primary Assembly

      Range
      537017974..537020351
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_044487773.1 → XP_044343708.1  heat stress transcription factor A-4d-like

      UniProtKB/TrEMBL
      A0A024DCA7, A0A3B5Y4P8
      Conserved Domains (1) summary
      smart00415
      Location:21 → 114
      HSF; heat shock factor
    Nucleotide Protein
    Heading Accession and Version

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