U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Nucleotide

    • Showing Current items.

    Rbfox3 RNA binding protein, fox-1 homolog (C. elegans) 3 [ Mus musculus (house mouse) ]

    Gene ID: 52897, updated on 2-Nov-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    Rbfox3provided by MGI
    Official Full Name
    RNA binding protein, fox-1 homolog (C. elegans) 3provided by MGI
    Primary source
    MGI:MGI:106368
    See related
    Ensembl:ENSMUSG00000025576 AllianceGenome:MGI:106368
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    NeuN; Fox-3; Hrnbp3; Neuna60
    Summary
    Enables DNA binding activity. Predicted to be involved in nervous system development and regulation of alternative mRNA splicing, via spliceosome. Located in nucleus and perikaryon. Is expressed in dorsal root ganglion; nervous system; and sensory organ. Orthologous to human RBFOX3 (RNA binding fox-1 homolog 3). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Biased expression in cerebellum adult (RPKM 15.0), frontal lobe adult (RPKM 9.4) and 7 other tissues See more
    Orthologs
    human all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See Rbfox3 in Genome Data Viewer
    Location:
    11 E2; 11 83.22 cM
    Exon count:
    22
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (118380586..118802423, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (118489760..118911597, complement)

    Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_31303 Neighboring gene STARR-positive B cell enhancer ABC_E3042 Neighboring gene ribosomal protein L18 pseudogene Neighboring gene endo-beta-N-acetylglucosaminidase Neighboring gene predicted gene, 53655 Neighboring gene predicted gene, 53656 Neighboring gene predicted gene 11750 Neighboring gene STARR-positive B cell enhancer ABC_E10734 Neighboring gene STARR-seq mESC enhancer starr_31311 Neighboring gene predicted gene, 35710 Neighboring gene ectonucleotide pyrophosphatase/phosphodiesterase 7

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Expression

    Go to the top of the page Help
    • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Postnatal phenotype and localization of spinal cord V1 derived interneurons. Alvarez FJ, et al. J Comp Neurol, 2005 Dec 12. PMID 16255029, Free PMC Article
    2. Axonal injury following mild traumatic brain injury is exacerbated by repetitive insult and is linked to the delayed attenuation of NeuN expression without concomitant neuronal death in the mouse. Ogino Y, et al. Brain Pathol, 2022 Mar. PMID 34729854, Free PMC Article
    3. Conditional reduction of adult neurogenesis impairs bidirectional hippocampal synaptic plasticity. Massa F, et al. Proc Natl Acad Sci U S A, 2011 Apr 19. PMID 21464314, Free PMC Article
    4. Time-course of neuronal death in the mouse pilocarpine model of chronic epilepsy using Fluoro-Jade C staining. Wang L, et al. Brain Res, 2008 Nov 19. PMID 18708038
    5. Characterization of the neuronal marker NeuN as a multiply phosphorylated antigen with discrete subcellular localization. Lind D, et al. J Neurosci Res, 2005 Feb 1. PMID 15605376

    See all (1000) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. NeuN distribution in brain structures of normal and Zika-infected suckling mice.
      Title: NeuN distribution in brain structures of normal and Zika-infected suckling mice.
    2. Neuronal splicing regulator RBFOX3 mediates seizures via regulating Vamp1 expression preferentially in NPY-expressing GABAergic neurons.
      Title: Neuronal splicing regulator RBFOX3 mediates seizures via regulating Vamp1 expression preferentially in NPY-expressing GABAergic neurons.
    3. Axonal injury following mild traumatic brain injury is exacerbated by repetitive insult and is linked to the delayed attenuation of NeuN expression without concomitant neuronal death in the mouse.
      Title: Axonal injury following mild traumatic brain injury is exacerbated by repetitive insult and is linked to the delayed attenuation of NeuN expression without concomitant neuronal death in the mouse.
    4. These findings suggest that Rbfox3/NeuN regulates the alternative splicing of tau exon 10 and that decreased Rbfox3/NeuN may lower the ratio of 4R-tau/3R-tau
      Title: Rbfox3/NeuN Regulates Alternative Splicing of Tau Exon 10.
    5. Knockdown of Rbfox3, encoding neuron-specific splicing factor neuronal nuclei (NeuN) in Snord116+/--derived neurons, reduced splicing of the transgene in neurons... these results demonstrate that exogenous expression and neuron-specific splicing of the Snord116 locus are insufficient to rescue the genetic deficiency of Snord116 paternal deletion
      Title: Prader-Willi locus Snord116 RNA processing requires an active endogenous allele and neuron-specific splicing by Rbfox3/NeuN.
    6. Rbfox3-/- mice displayed normal non-image and image forming functions. Taken together, our results suggest RBFOX3 is dispensable for visual function
      Title: RBFOX3/NeuN is dispensable for visual function.
    7. Results demonstrate the important role of RBFOX3 during neural development and maturation and show that abnormalities in synaptic structure and function occur in Rbfox3 homozygous knockout mice. These findings may offer mechanistic explanations for human brain diseases associated with dysfunctional RBFOX3.
      Title: Neuronal Splicing Regulator RBFOX3 (NeuN) Regulates Adult Hippocampal Neurogenesis and Synaptogenesis.
    8. RBFOX3/NeuN is Required for Hippocampal Circuit Balance and Function.
      Title: RBFOX3/NeuN is Required for Hippocampal Circuit Balance and Function.
    9. In vitro analyses revealed that Rbfox3 functions as a positive and a negative regulator at the stage of pri-miRNA processing to precursor miRNA (pre-miRNA).
      Title: Rbfox3 controls the biogenesis of a subset of microRNAs.
    10. Rbfox3-dependent Numb alternative splicing plays an important role in the progression of neuronal differentiation during vertebrate development.
      Title: Rbfox3-regulated alternative splicing of Numb promotes neuronal differentiation during development.
    Submit: New GeneRIF Correction See all GeneRIFs (15)

    Variation

    Go to the top of the page Help

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables DNA binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables mRNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in RNA splicing IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in mRNA processing IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in nervous system development IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in nervous system development IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in regulation of alternative mRNA splicing, via spliceosome IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in regulation of alternative mRNA splicing, via spliceosome IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in intracellular anatomical structure IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in neuronal cell body IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleoplasm TAS
    Traceable Author Statement
    more info
    		  
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in perikaryon IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    RNA binding protein fox-1 homolog 3
    Names
    fox-1 homolog C
    hexaribonucleotide binding protein 3
    neuN antigen
    neuronal nuclear antigen A60
    neuronal nuclei antigen

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001024931.2 → NP_001020102.2  RNA binding protein fox-1 homolog 3 isoform 3

      See identical proteins and their annotated locations for NP_001020102.2

      Status: VALIDATED

      Description
      Transcript Variant: This variant (3) uses an alternate in-frame splice junction at the 5' end of an exon and has an alternate 3' UTR and coding sequence compared to variant 1. The resulting isoform (3) lacks an alternate internal segment and is shorter at the C-terminus compared to isoform 1. Variants 3 and 6 both encode the same isoform (3).
      Source sequence(s)
      AK049926, AK079086, AL591075
      Consensus CDS
      CCDS25705.1
      UniProtKB/TrEMBL
      Q8VI61
      Related
      ENSMUSP00000101885.3, ENSMUST00000106278.9
      Conserved Domains (3) summary
      cd12407
      Location:99 → 174
      RRM_FOX1_like; RNA recognition motif in vertebrate RNA binding protein fox-1 homologs and similar proteins
      TIGR01661
      Location:25 → 170
      ELAV_HUD_SF; ELAV/HuD family splicing factor
      pfam12414
      Location:208 → 298
      Fox-1_C; Calcitonin gene-related peptide regulator C terminal

    2. NM_001039167.1 → NP_001034256.1  RNA binding protein fox-1 homolog 3 isoform 1

      See identical proteins and their annotated locations for NP_001034256.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (1).
      Source sequence(s)
      AK049926, AK079086, AK160816, AL591075
      Consensus CDS
      CCDS25706.1
      UniProtKB/Swiss-Prot
      A2A4W7, A2A4W8, B7ZC12, B7ZC13, D1GI07, Q3TUE0, Q7TQI4, Q8BIF2
      UniProtKB/TrEMBL
      Q8VI61
      Related
      ENSMUSP00000017576.5, ENSMUST00000017576.11
      Conserved Domains (3) summary
      cd12407
      Location:99 → 174
      RRM_FOX1_like; RNA recognition motif in vertebrate RNA binding protein fox-1 homologs and similar proteins
      TIGR01661
      Location:25 → 170
      ELAV_HUD_SF; ELAV/HuD family splicing factor
      pfam12414
      Location:208 → 345
      Fox-1_C; Calcitonin gene-related peptide regulator C terminal

    3. NM_001039168.1 → NP_001034257.1  RNA binding protein fox-1 homolog 3 isoform 2

      Status: VALIDATED

      Description
      Transcript Variant: This variant (2) uses an alternate in-frame splice junction at the 5' end of an exon compared to variant 1. The resulting isoform (2) has the same N- and C-termini but is shorter compared to isoform 1.
      Source sequence(s)
      AK049926, AK079086, AK086669, AL591075
      UniProtKB/Swiss-Prot
      Q8BIF2
      Conserved Domains (4) summary
      COG0724
      Location:83 → 231
      RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
      cd12407
      Location:98 → 173
      RRM_FOX1_like; RNA recognition motif in vertebrate RNA binding protein fox-1 homologs and similar proteins
      pfam12414
      Location:207 → 297
      Fox-1_C; Calcitonin gene-related peptide regulator C terminal
      pfam16000
      Location:17 → 80
      CARMIL_C; CARMIL C-terminus

    4. NM_001285436.1 → NP_001272365.1  RNA binding protein fox-1 homolog 3 isoform 4

      See identical proteins and their annotated locations for NP_001272365.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (4) uses an alternate in-frame splice junction at the 5' end of an exon and has an alternate 3' UTR and coding sequence compared to variant 1. The resulting isoform (4) contains an alternate internal segment and is shorter at the C-terminus compared to isoform 1.
      Source sequence(s)
      AK079086, AK160816, AL591075
      Consensus CDS
      CCDS70360.1
      UniProtKB/TrEMBL
      Q8VI61
      Related
      ENSMUSP00000113636.2, ENSMUST00000117731.8
      Conserved Domains (3) summary
      cd12407
      Location:99 → 174
      RRM_FOX1_like; RNA recognition motif in vertebrate RNA binding protein fox-1 homologs and similar proteins
      TIGR01661
      Location:25 → 170
      ELAV_HUD_SF; ELAV/HuD family splicing factor
      pfam12414
      Location:208 → 345
      Fox-1_C; Calcitonin gene-related peptide regulator C terminal

    5. NM_001285437.1 → NP_001272366.1  RNA binding protein fox-1 homolog 3 isoform 5

      See identical proteins and their annotated locations for NP_001272366.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (5) differs in the 5' UTR, lacks an alternate in-frame exon, and has an alternate 3' UTR and coding sequence compared to variant 1. The resulting isoform (5) lacks an alternate internal segment and is shorter at the C-terminus compared to isoform 1.
      Source sequence(s)
      AK160816, AL591075, BC054403
      Consensus CDS
      CCDS70358.1
      UniProtKB/TrEMBL
      Q8VI61
      Related
      ENSMUSP00000069598.6, ENSMUST00000069343.12
      Conserved Domains (3) summary
      COG0724
      Location:84 → 133
      RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
      pfam12414
      Location:177 → 314
      Fox-1_C; Calcitonin gene-related peptide regulator C terminal
      cl17169
      Location:99 → 138
      RRM_SF; RNA recognition motif (RRM) superfamily

    6. NM_001285438.1 → NP_001272367.1  RNA binding protein fox-1 homolog 3 isoform 3

      See identical proteins and their annotated locations for NP_001272367.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (6) differs in the 5' UTR, uses an alternate in-frame splice junction at the 5' end of an exon, and has an alternate 3' UTR and coding sequence compared to variant 1. The resulting isoform (3) lacks an alternate internal segment and is shorter at the C-terminus compared to isoform 1. Variants 3 and 6 both encode the same isoform (3).
      Source sequence(s)
      AK032676, AK160816, AL591075, BB623084
      Consensus CDS
      CCDS25705.1
      UniProtKB/TrEMBL
      Q8VI61
      Related
      ENSMUSP00000099312.2, ENSMUST00000103023.8
      Conserved Domains (3) summary
      cd12407
      Location:99 → 174
      RRM_FOX1_like; RNA recognition motif in vertebrate RNA binding protein fox-1 homologs and similar proteins
      TIGR01661
      Location:25 → 170
      ELAV_HUD_SF; ELAV/HuD family splicing factor
      pfam12414
      Location:208 → 298
      Fox-1_C; Calcitonin gene-related peptide regulator C terminal

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000077.7 Reference GRCm39 C57BL/6J

      Range
      118380586..118802423 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_030246136.1 → XP_030101996.1  RNA binding protein fox-1 homolog 3 isoform X5

      Conserved Domains (3) summary
      TIGR01661
      Location:25 → 170
      ELAV_HUD_SF; ELAV/HuD family splicing factor
      pfam12414
      Location:208 → 298
      Fox-1_C; Calcitonin gene-related peptide regulator C terminal
      cd12407
      Location:99 → 174
      RRM_FOX1_like; RNA recognition motif (RRM) found in vertebrate RNA binding protein fox-1 homologs and similar proteins

    2. XM_017314662.2 → XP_017170151.1  RNA binding protein fox-1 homolog 3 isoform X1

      UniProtKB/Swiss-Prot
      A2A4W7, A2A4W8, B7ZC12, B7ZC13, D1GI07, Q3TUE0, Q7TQI4, Q8BIF2
      UniProtKB/TrEMBL
      Q8VI61
      Conserved Domains (3) summary
      cd12407
      Location:99 → 174
      RRM_FOX1_like; RNA recognition motif in vertebrate RNA binding protein fox-1 homologs and similar proteins
      TIGR01661
      Location:25 → 170
      ELAV_HUD_SF; ELAV/HuD family splicing factor
      pfam12414
      Location:208 → 345
      Fox-1_C; Calcitonin gene-related peptide regulator C terminal

    3. XM_006533726.4 → XP_006533789.1  RNA binding protein fox-1 homolog 3 isoform X2

      UniProtKB/TrEMBL
      Q8VI61
      Conserved Domains (3) summary
      cd12407
      Location:98 → 173
      RRM_FOX1_like; RNA recognition motif in vertebrate RNA binding protein fox-1 homologs and similar proteins
      TIGR01661
      Location:25 → 169
      ELAV_HUD_SF; ELAV/HuD family splicing factor
      pfam12414
      Location:207 → 344
      Fox-1_C; Calcitonin gene-related peptide regulator C terminal

    4. XM_006533727.4 → XP_006533790.1  RNA binding protein fox-1 homolog 3 isoform X5

      See identical proteins and their annotated locations for XP_006533790.1

      UniProtKB/Swiss-Prot
      Q8BIF2
      Related
      ENSMUSP00000113987.2, ENSMUST00000120061.8
      Conserved Domains (3) summary
      TIGR01661
      Location:25 → 170
      ELAV_HUD_SF; ELAV/HuD family splicing factor
      pfam12414
      Location:208 → 298
      Fox-1_C; Calcitonin gene-related peptide regulator C terminal
      cd12407
      Location:99 → 174
      RRM_FOX1_like; RNA recognition motif (RRM) found in vertebrate RNA binding protein fox-1 homologs and similar proteins

    5. XM_030246134.2 → XP_030101994.1  RNA binding protein fox-1 homolog 3 isoform X5

      Conserved Domains (3) summary
      TIGR01661
      Location:25 → 170
      ELAV_HUD_SF; ELAV/HuD family splicing factor
      pfam12414
      Location:208 → 298
      Fox-1_C; Calcitonin gene-related peptide regulator C terminal
      cd12407
      Location:99 → 174
      RRM_FOX1_like; RNA recognition motif (RRM) found in vertebrate RNA binding protein fox-1 homologs and similar proteins

    6. XM_006533722.5 → XP_006533785.1  RNA binding protein fox-1 homolog 3 isoform X1

      See identical proteins and their annotated locations for XP_006533785.1

      UniProtKB/Swiss-Prot
      A2A4W7, A2A4W8, B7ZC12, B7ZC13, D1GI07, Q3TUE0, Q7TQI4, Q8BIF2
      UniProtKB/TrEMBL
      Q8VI61
      Conserved Domains (3) summary
      cd12407
      Location:99 → 174
      RRM_FOX1_like; RNA recognition motif in vertebrate RNA binding protein fox-1 homologs and similar proteins
      TIGR01661
      Location:25 → 170
      ELAV_HUD_SF; ELAV/HuD family splicing factor
      pfam12414
      Location:208 → 345
      Fox-1_C; Calcitonin gene-related peptide regulator C terminal

    7. XM_036156838.1 → XP_036012731.1  RNA binding protein fox-1 homolog 3 isoform X5

      Conserved Domains (3) summary
      TIGR01661
      Location:25 → 170
      ELAV_HUD_SF; ELAV/HuD family splicing factor
      pfam12414
      Location:208 → 298
      Fox-1_C; Calcitonin gene-related peptide regulator C terminal
      cd12407
      Location:99 → 174
      RRM_FOX1_like; RNA recognition motif (RRM) found in vertebrate RNA binding protein fox-1 homologs and similar proteins

    8. XM_036156840.1 → XP_036012733.1  RNA binding protein fox-1 homolog 3 isoform X5

      Conserved Domains (3) summary
      TIGR01661
      Location:25 → 170
      ELAV_HUD_SF; ELAV/HuD family splicing factor
      pfam12414
      Location:208 → 298
      Fox-1_C; Calcitonin gene-related peptide regulator C terminal
      cd12407
      Location:99 → 174
      RRM_FOX1_like; RNA recognition motif (RRM) found in vertebrate RNA binding protein fox-1 homologs and similar proteins

    9. XM_006533725.5 → XP_006533788.1  RNA binding protein fox-1 homolog 3 isoform X1

      See identical proteins and their annotated locations for XP_006533788.1

      UniProtKB/Swiss-Prot
      A2A4W7, A2A4W8, B7ZC12, B7ZC13, D1GI07, Q3TUE0, Q7TQI4, Q8BIF2
      UniProtKB/TrEMBL
      Q8VI61
      Conserved Domains (3) summary
      cd12407
      Location:99 → 174
      RRM_FOX1_like; RNA recognition motif in vertebrate RNA binding protein fox-1 homologs and similar proteins
      TIGR01661
      Location:25 → 170
      ELAV_HUD_SF; ELAV/HuD family splicing factor
      pfam12414
      Location:208 → 345
      Fox-1_C; Calcitonin gene-related peptide regulator C terminal

    10. XM_017314661.2 → XP_017170150.1  RNA binding protein fox-1 homolog 3 isoform X1

      UniProtKB/Swiss-Prot
      A2A4W7, A2A4W8, B7ZC12, B7ZC13, D1GI07, Q3TUE0, Q7TQI4, Q8BIF2
      UniProtKB/TrEMBL
      Q8VI61
      Conserved Domains (3) summary
      cd12407
      Location:99 → 174
      RRM_FOX1_like; RNA recognition motif in vertebrate RNA binding protein fox-1 homologs and similar proteins
      TIGR01661
      Location:25 → 170
      ELAV_HUD_SF; ELAV/HuD family splicing factor
      pfam12414
      Location:208 → 345
      Fox-1_C; Calcitonin gene-related peptide regulator C terminal

    11. XM_030246135.2 → XP_030101995.1  RNA binding protein fox-1 homolog 3 isoform X5

      Conserved Domains (3) summary
      TIGR01661
      Location:25 → 170
      ELAV_HUD_SF; ELAV/HuD family splicing factor
      pfam12414
      Location:208 → 298
      Fox-1_C; Calcitonin gene-related peptide regulator C terminal
      cd12407
      Location:99 → 174
      RRM_FOX1_like; RNA recognition motif (RRM) found in vertebrate RNA binding protein fox-1 homologs and similar proteins

    12. XM_036156839.1 → XP_036012732.1  RNA binding protein fox-1 homolog 3 isoform X5

      Conserved Domains (3) summary
      TIGR01661
      Location:25 → 170
      ELAV_HUD_SF; ELAV/HuD family splicing factor
      pfam12414
      Location:208 → 298
      Fox-1_C; Calcitonin gene-related peptide regulator C terminal
      cd12407
      Location:99 → 174
      RRM_FOX1_like; RNA recognition motif (RRM) found in vertebrate RNA binding protein fox-1 homologs and similar proteins

    13. XM_030246130.2 → XP_030101990.1  RNA binding protein fox-1 homolog 3 isoform X1

      UniProtKB/Swiss-Prot
      A2A4W7, A2A4W8, B7ZC12, B7ZC13, D1GI07, Q3TUE0, Q7TQI4, Q8BIF2
      UniProtKB/TrEMBL
      Q8VI61
      Conserved Domains (3) summary
      cd12407
      Location:99 → 174
      RRM_FOX1_like; RNA recognition motif in vertebrate RNA binding protein fox-1 homologs and similar proteins
      TIGR01661
      Location:25 → 170
      ELAV_HUD_SF; ELAV/HuD family splicing factor
      pfam12414
      Location:208 → 345
      Fox-1_C; Calcitonin gene-related peptide regulator C terminal

    14. XM_030246141.1 → XP_030102001.1  RNA binding protein fox-1 homolog 3 isoform X7

      UniProtKB/TrEMBL
      Q8VI61
      Conserved Domains (3) summary
      cd12407
      Location:98 → 173
      RRM_FOX1_like; RNA recognition motif in vertebrate RNA binding protein fox-1 homologs and similar proteins
      TIGR01661
      Location:25 → 169
      ELAV_HUD_SF; ELAV/HuD family splicing factor
      pfam12414
      Location:207 → 297
      Fox-1_C; Calcitonin gene-related peptide regulator C terminal

    15. XM_030246139.1 → XP_030101999.1  RNA binding protein fox-1 homolog 3 isoform X6

      UniProtKB/TrEMBL
      Q8VI61
      Conserved Domains (3) summary
      cd12407
      Location:99 → 174
      RRM_FOX1_like; RNA recognition motif in vertebrate RNA binding protein fox-1 homologs and similar proteins
      TIGR01661
      Location:25 → 170
      ELAV_HUD_SF; ELAV/HuD family splicing factor
      pfam12414
      Location:208 → 298
      Fox-1_C; Calcitonin gene-related peptide regulator C terminal

    16. XM_030246140.1 → XP_030102000.1  RNA binding protein fox-1 homolog 3 isoform X7

      UniProtKB/TrEMBL
      Q8VI61
      Conserved Domains (3) summary
      cd12407
      Location:98 → 173
      RRM_FOX1_like; RNA recognition motif in vertebrate RNA binding protein fox-1 homologs and similar proteins
      TIGR01661
      Location:25 → 169
      ELAV_HUD_SF; ELAV/HuD family splicing factor
      pfam12414
      Location:207 → 297
      Fox-1_C; Calcitonin gene-related peptide regulator C terminal

    17. XM_030246133.1 → XP_030101993.1  RNA binding protein fox-1 homolog 3 isoform X4

      UniProtKB/TrEMBL
      Q8VI61
      Conserved Domains (3) summary
      cd12407
      Location:98 → 173
      RRM_FOX1_like; RNA recognition motif in vertebrate RNA binding protein fox-1 homologs and similar proteins
      TIGR01661
      Location:25 → 169
      ELAV_HUD_SF; ELAV/HuD family splicing factor
      pfam12414
      Location:207 → 344
      Fox-1_C; Calcitonin gene-related peptide regulator C terminal

    18. XM_017314663.2 → XP_017170152.1  RNA binding protein fox-1 homolog 3 isoform X3

      UniProtKB/TrEMBL
      Q8VI61
      Conserved Domains (3) summary
      cd12407
      Location:99 → 174
      RRM_FOX1_like; RNA recognition motif in vertebrate RNA binding protein fox-1 homologs and similar proteins
      TIGR01661
      Location:25 → 170
      ELAV_HUD_SF; ELAV/HuD family splicing factor
      pfam12414
      Location:208 → 345
      Fox-1_C; Calcitonin gene-related peptide regulator C terminal

    19. XM_030246137.2 → XP_030101997.1  RNA binding protein fox-1 homolog 3 isoform X6

      UniProtKB/TrEMBL
      Q8VI61
      Conserved Domains (3) summary
      cd12407
      Location:99 → 174
      RRM_FOX1_like; RNA recognition motif in vertebrate RNA binding protein fox-1 homologs and similar proteins
      TIGR01661
      Location:25 → 170
      ELAV_HUD_SF; ELAV/HuD family splicing factor
      pfam12414
      Location:208 → 298
      Fox-1_C; Calcitonin gene-related peptide regulator C terminal

    20. XM_030246131.2 → XP_030101991.1  RNA binding protein fox-1 homolog 3 isoform X3

      UniProtKB/TrEMBL
      Q8VI61
      Conserved Domains (3) summary
      cd12407
      Location:99 → 174
      RRM_FOX1_like; RNA recognition motif in vertebrate RNA binding protein fox-1 homologs and similar proteins
      TIGR01661
      Location:25 → 170
      ELAV_HUD_SF; ELAV/HuD family splicing factor
      pfam12414
      Location:208 → 345
      Fox-1_C; Calcitonin gene-related peptide regulator C terminal

    21. XM_030246138.2 → XP_030101998.1  RNA binding protein fox-1 homolog 3 isoform X6

      UniProtKB/TrEMBL
      Q8VI61
      Conserved Domains (3) summary
      cd12407
      Location:99 → 174
      RRM_FOX1_like; RNA recognition motif in vertebrate RNA binding protein fox-1 homologs and similar proteins
      TIGR01661
      Location:25 → 170
      ELAV_HUD_SF; ELAV/HuD family splicing factor
      pfam12414
      Location:208 → 298
      Fox-1_C; Calcitonin gene-related peptide regulator C terminal

    22. XM_030246132.2 → XP_030101992.1  RNA binding protein fox-1 homolog 3 isoform X3

      UniProtKB/TrEMBL
      Q8VI61
      Conserved Domains (3) summary
      cd12407
      Location:99 → 174
      RRM_FOX1_like; RNA recognition motif in vertebrate RNA binding protein fox-1 homologs and similar proteins
      TIGR01661
      Location:25 → 170
      ELAV_HUD_SF; ELAV/HuD family splicing factor
      pfam12414
      Location:208 → 345
      Fox-1_C; Calcitonin gene-related peptide regulator C terminal
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8BIF2.2 GenPept UniProtKB/Swiss-Prot:Q8BIF2

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Other Literature Sources
    Chemical Information
    Molecular Biology Databases
    Research Materials
    Tools