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    DCAF7 DDB1 and CUL4 associated factor 7 [ Callithrix jacchus (white-tufted-ear marmoset) ]

    Gene ID: 100390366, updated on 8-Mar-2024

    Summary

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    Gene symbol
    DCAF7
    Gene description
    DDB1 and CUL4 associated factor 7
    See related
    Ensembl:ENSCJAG00000019745
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Callithrix jacchus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
    Orthologs
    human mouse all
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    Genomic context

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    See DCAF7 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 5 NC_071446.1 (84834431..84877368)
    105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 5 NC_048387.1 (87585957..87628900)

    Chromosome 5 - NC_071446.1Genomic Context describing neighboring genes Neighboring gene angiotensin-converting enzyme-like protein Ace3 Neighboring gene uncharacterized LOC103793129 Neighboring gene potassium voltage-gated channel subfamily H member 6 Neighboring gene U6 spliceosomal RNA Neighboring gene translational activator of mitochondrially encoded cytochrome c oxidase I Neighboring gene elongation factor 1-delta-like Neighboring gene mitogen-activated protein kinase kinase kinase 3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    DDB1- and CUL4-associated factor 7

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mCalJa1.2.pat.X

    Genomic

    1. NC_071446.1 Reference mCalJa1.2.pat.X

      Range
      84834431..84877368
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002748135.6 → XP_002748181.1  DDB1- and CUL4-associated factor 7

      See identical proteins and their annotated locations for XP_002748181.1

      UniProtKB/TrEMBL
      F6SPY4
      Related
      ENSCJAP00000036699.1
      Conserved Domains (2) summary
      sd00039
      Location:71 → 116
      7WD40; WD40 repeat [structural motif]
      cl29593
      Location:19 → 295
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    Nucleotide Protein
    Heading Accession and Version

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