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    gba3.L glucosidase, beta, acid 3 (gene/pseudogene) L homeolog [ Xenopus laevis (African clawed frog) ]

    Gene ID: 447502, updated on 17-Aug-2024

    Summary

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    Official Symbol
    gba3.L
    Official Full Name
    glucosidase, beta, acid 3 (gene/pseudogene) L homeolog
    Primary source
    Xenbase:XB-GENE-954393
    Locus tag
    XELAEV_18005171mg
    See related
    EnsemblRapid:ENSXLAG00005023945
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus laevis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
    Also known as
    gba3
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    Genomic context

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    See gba3.L in Genome Data Viewer
    Location:
    chromosome: 1L
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 1L NC_054371.1 (32077456..32107581)
    100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 1L NC_030724.1 (22871540..22901969)

    Chromosome 1L - NC_054371.1Genomic Context describing neighboring genes Neighboring gene parkin coregulated like L homeolog Neighboring gene Kv channel interacting protein 4 L homeolog Neighboring gene adhesion G protein-coupled receptor A3 L homeolog Neighboring gene PPARG coactivator 1 alpha L homeolog Neighboring gene DEAH-box helicase 15 L homeolog

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
    2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Clone Names

    • MGC82041

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables beta-galactosidase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables beta-glucosidase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables glycosylceramidase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables hydrolase activity, acting on glycosyl bonds IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables hydrolase activity, hydrolyzing O-glycosyl compounds IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within carbohydrate metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within glycosylceramide catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    glucosidase, beta, acid 3 (gene/pseudogene)
    Names
    glucosidase, beta, acid 3 (cytosolic)
    NP_001087678.1
    XP_018103380.1
    XP_041437398.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001094209.1 → NP_001087678.1  glucosidase, beta, acid 3 (gene/pseudogene)

      See identical proteins and their annotated locations for NP_001087678.1

      Status: PROVISIONAL

      Source sequence(s)
      BC081073
      UniProtKB/TrEMBL
      Q66J37
      Related
      ENSXLAP00005070933.1, ENSXLAT00005072479.1
      Conserved Domains (1) summary
      cl23725
      Location:5 → 469
      Glyco_hydro_1; Glycosyl hydrolase family 1

    RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_laevis_v10.1 Primary Assembly

    Genomic

    1. NC_054371.1 Reference Xenopus_laevis_v10.1 Primary Assembly

      Range
      32077456..32107581
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_018247891.2 → XP_018103380.1  glucosidase, beta, acid 3 (gene/pseudogene) isoform X1

      UniProtKB/TrEMBL
      A0A974I2E1
      Conserved Domains (1) summary
      cl23725
      Location:11 → 475
      Glyco_hydro; Glycosyl hydrolases

    2. XM_041581464.1 → XP_041437398.1  glucosidase, beta, acid 3 (gene/pseudogene) isoform X1

      UniProtKB/TrEMBL
      A0A974I2E1
      Conserved Domains (1) summary
      cl23725
      Location:11 → 475
      Glyco_hydro; Glycosyl hydrolases
    Nucleotide Protein Strain
    Heading Accession and Version

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