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    MGC82989 MGC82989 protein [ Xenopus laevis (African clawed frog) ]

    Gene ID: 444414, updated on 18-Aug-2023

    Summary

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    Gene symbol
    MGC82989
    Gene description
    MGC82989 protein
    Locus tag
    XELAEV_18013978mg
    See related
    EnsemblRapid:ENSXLAG00005013316
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus laevis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
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    Genomic context

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    Location:
    chromosome: 2L
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 2L NC_054373.1 (190834373..190846928)
    100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 2L NC_030726.1 (173756441..173769374)

    Chromosome 2L - NC_054373.1Genomic Context describing neighboring genes Neighboring gene dynein heavy chain domain-containing protein 1 Neighboring gene ribosomal RNA processing 8 L homeolog Neighboring gene tripeptidyl peptidase I L homeolog Neighboring gene translation initiation factor IF-2-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
    2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    Integrin-linked protein kinase; MGC82989 protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001092516.1 → NP_001085985.1  Integrin-linked protein kinase

      See identical proteins and their annotated locations for NP_001085985.1

      Status: PROVISIONAL

      Source sequence(s)
      BC073649
      UniProtKB/TrEMBL
      A0A974HZW7, Q6GN69
      Related
      ENSXLAP00005039315.1, ENSXLAT00005040236.1
      Conserved Domains (3) summary
      COG0666
      Location:27 → 162
      ANKYR; Ankyrin repeat [Signal transduction mechanisms]
      cd14057
      Location:197 → 449
      PK_ILK; Pseudokinase domain of Integrin Linked Kinase
      sd00045
      Location:33 → 64
      ANK; ANK repeat [structural motif]

    RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_laevis_v10.1 Primary Assembly

    Genomic

    1. NC_054373.1 Reference Xenopus_laevis_v10.1 Primary Assembly

      Range
      190834373..190846928
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_041580994.1 → XP_041436928.1  MGC82989 protein isoform X1

      UniProtKB/TrEMBL
      A0A974HZW7, Q6GN69
      Conserved Domains (3) summary
      COG0666
      Location:27 → 162
      ANKYR; Ankyrin repeat [Signal transduction mechanisms]
      cd14057
      Location:197 → 449
      PK_ILK; Pseudokinase domain of Integrin Linked Kinase
      sd00045
      Location:33 → 64
      ANK; ANK repeat [structural motif]
    Nucleotide Protein Strain
    Heading Accession and Version

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