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    LOC11423860 RING-H2 finger protein ATL64 [ Medicago truncatula (barrel medic) ]

    Gene ID: 11423860, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC11423860
    Gene description
    RING-H2 finger protein ATL64
    Locus tag
    MtrunA17_Chr4g0069751
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Medicago truncatula
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Medicago
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    Genomic context

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    See LOC11423860 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    102 current MtrunA17r5.0-ANR (GCF_003473485.1) 4 NC_053045.1 (59566943..59568054)
    101 previous assembly MedtrA17_4.0 (GCF_000219495.3) 4 NC_016410.2 (51443541..51444663)

    Chromosome 4 - NC_053045.1Genomic Context describing neighboring genes Neighboring gene protein TIFY 3 Neighboring gene vacuolar protein sorting-associated protein 27 Neighboring gene E3 ubiquitin-protein ligase ATL4-like Neighboring gene uncharacterized histidine-rich protein DDB_G0274557

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ubiquitin protein ligase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein ubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    RING-H2 finger protein ATL64
    Names
    anaphase-promoting complex subunit 11 RING-H2 finger protein
    putative transcription factor C2H2 family

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Medicago truncatula Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference MtrunA17r5.0-ANR Primary Assembly

    Genomic

    1. NC_053045.1 Reference MtrunA17r5.0-ANR Primary Assembly

      Range
      59566943..59568054
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003609871.4 → XP_003609919.1  RING-H2 finger protein ATL64

      See identical proteins and their annotated locations for XP_003609919.1

      UniProtKB/TrEMBL
      G7JR49
      Conserved Domains (1) summary
      cl17238
      Location:78 → 128
      RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain
    Nucleotide Protein
    Heading Accession and Version

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