U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Nucleotide

    • Showing Current items.

    LOC130730112 transcription factor bHLH100-like [ Lotus japonicus ]

    Gene ID: 130730112, updated on 2-Nov-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC130730112
    Gene description
    transcription factor bHLH100-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Lotus japonicus
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; robinioid clade; Loteae; Lotus
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC130730112 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2023_06 current LjGifu_v1.2 (GCF_012489685.1) 1 NC_080041.1 (122987325..122989563)

    Chromosome 1 - NC_080041.1Genomic Context describing neighboring genes Neighboring gene transcription factor bHLH101-like Neighboring gene transcription factor ORG2-like Neighboring gene transcription factor bHLH100-like Neighboring gene uncharacterized LOC130723511

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_080041.1 Chromosome 1 Reference LjGifu_v1.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein dimerization activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of RNA polymerase II transcription regulator complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    transcription factor bHLH100-like

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_012489685.1-RS_2023_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference LjGifu_v1.2

    Genomic

    1. NC_080041.1 Reference LjGifu_v1.2

      Range
      122987325..122989563
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_057582019.1 → XP_057438002.1  transcription factor bHLH100-like isoform X1

    2. XM_057582020.1 → XP_057438003.1  transcription factor bHLH100-like isoform X2

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases